| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3172 |
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| Symbol | |
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| ID | 4075342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 152144 |
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| End bp | 153709 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638004675 |
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| Product | ASPIC/UnbV |
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| Protein accession | YP_611408 |
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| Protein GI | 99078150 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.72438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGGC CTGAGACGTG CGTTTGGCCT GTGGCGGCCC TGTTTGCTTC GGTGGCGCAG
GCCGACCCGC AGATCCCCAG GTTTACTCCG ATCGAGATGG GTGAACATAT CTACAGCGGC
GGCTGGGAAC ACTACGTGGG CGGCGGTCTG GCGGTGTTCG ACTGCAACGG CGACGCTCTG
CCGGAGCTCT ATGCCGCTGG TGGCGAGACC CCGGCCCAGT TGTTCCTCAA CACCTCCGGC
GCGGACGGCG CGCTTTCTTT TCAGCCGGCC ACGCCCGAGG CGCTGGCCCT GACGGGCGTG
ACGGGGGCCT ATCCCATCGA CATTGATGGC GACGGCCATC TTGATCTGGC GGTGATGCGG
GCCGGGACGG ATCTCTTGCT GCAAGGGCAG GGGGGCTGCG CCTTTCACCC CTTTCAGGGA
CTGGGCTTTC AGAGCGGCGA TCACTGGACC ACGGGTTTTT CCGCCACTTG GGAGGGCGAG
AACACCCTGC CGACGCTGGC CTTTGGCACC TATGTGGACC GCGCCAACCC CGAAGGGCCG
TTTGGCACCT GCGATGATAC ACTGCTCTAT CGCCCCAGCG GCGACAAATA CGGCCCCCCC
GAGGCGCTGT CGCCGGGCTA TTGCGCGCTC TCGGTGCTGT TCAGCGACTG GAACCGCACA
GGCCGCGCCG ATCTGCGGCT GTCGAACGAC CGGCACTATT ATGTGCGCGG CGGGCAGGAA
CAGATGTGGG CGATGGAGGC CACCCCGCGG CTCTATACTG AGGCCGAAGG CTGGAAGCCC
TATGCGCTCT GGGGCATGGG CATCGCCTCG CGCGACATGA ATGGCGACGG GTTTGCGGAT
GTCTATCTGA CGTCCATGGG CGATCAGAAG TTTCAACTGC GCAACCCCGA GGCCGAGGGG
CCGGTCTGGG AGGATGTCAC CTATGGGTTT GGCACTACCG CACATCGACC CTATACGGGC
GGCGATGGGC GCCCCTCGAC CGGCTGGCAC GCAGCCTTTG GCGACGTGAA CAACGACGGG
CTGGACGATA TTTTTGTGAC CAAGGGCAAC GTGGAACAGA TGCCCGATGC CGCCCAGAAA
GACCCCAATA ACCTGATGTT GCAGCAACAG GACGGCCTGT TCACCGAAGC CGGCGCAGAG
GCGGGGATCG CAAGCCTTCA GCGCGGGCGC GGGGGCGCTC TGGTTGATCT CAACCGCGAT
GGCCTGCTCG ATATGGCGGT GGTCAATCGC CGCGCCCCGC TCGAGGTCTG GCAAAACAGA
GGCCCCGCGG ATGCGACGGG CGGCAACTGG CTGCTGCTGC GCCTTGGCGC AGAGGGGCCC
AACCGGGACG CCATCGGCGC CTTTGTCGAA GTCACGGCTG GCGATCGCAC CTACCTGCGC
GAAGTGACGA TCGGCGGCGG ACATGCAGGC GGCGATCTGG GCGATCTGCA TTTTGGTCTT
GGCGGGGTGG AAACGGTCGA TCTGCGCGTG ACCTGGCCCG ATGGGCAGGT GTCGGATTGG
TCGACCGTGA AGGCCAATCA GCGGCTTTTG CTCCGTCCCG GACGCTTGCC GACGCCCGAG
GACTAA
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| Protein sequence | MRRPETCVWP VAALFASVAQ ADPQIPRFTP IEMGEHIYSG GWEHYVGGGL AVFDCNGDAL
PELYAAGGET PAQLFLNTSG ADGALSFQPA TPEALALTGV TGAYPIDIDG DGHLDLAVMR
AGTDLLLQGQ GGCAFHPFQG LGFQSGDHWT TGFSATWEGE NTLPTLAFGT YVDRANPEGP
FGTCDDTLLY RPSGDKYGPP EALSPGYCAL SVLFSDWNRT GRADLRLSND RHYYVRGGQE
QMWAMEATPR LYTEAEGWKP YALWGMGIAS RDMNGDGFAD VYLTSMGDQK FQLRNPEAEG
PVWEDVTYGF GTTAHRPYTG GDGRPSTGWH AAFGDVNNDG LDDIFVTKGN VEQMPDAAQK
DPNNLMLQQQ DGLFTEAGAE AGIASLQRGR GGALVDLNRD GLLDMAVVNR RAPLEVWQNR
GPADATGGNW LLLRLGAEGP NRDAIGAFVE VTAGDRTYLR EVTIGGGHAG GDLGDLHFGL
GGVETVDLRV TWPDGQVSDW STVKANQRLL LRPGRLPTPE D
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