| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3171 |
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| Symbol | |
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| ID | 4075341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 151141 |
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| End bp | 152124 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004674 |
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| Product | K+-dependent Na+/Ca+ exchanger related-protein |
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| Protein accession | YP_611407 |
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| Protein GI | 99078149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.71951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAA TTGGACTGCT TCTTGTGGTT GGCCTCGCCC TGCTGATGGT GGGAGGTGAT
CTCTTGGTGC GCGGTGCTGT GCAGGCTGCG GCCAGACTGG GGGTGTCGCC CTTGGTGATC
GGCCTCACCC TTGTCGGTTT TGGCACCTCT ACGCCCGAAC TCGTGACATC GGTGCAGGCC
GGGTTGAGCG GCGCACCGGG GATTGCTTAT GGCAACGTCG TGGGATCCAA TATTGCCAAT
ATCCTGTTGA TCGCGGGGAT TTCAGCCCTG TTGTGTCCGA TCATTGTCGC GCGGGCCGCT
CTCAGACGTG ATGCCGTGGT GATGCTGCTT GCGGCACTTG TATTCAGTGG CCTTGCAGCC
GTCTGGCCGA TGGGGCGCCT GAGTGGCGCT GCGCTCATTA TTGCCATGAT TGGCTACATA
ACCTTCGTGG TCCGCCAAGA GCGCCAGAAT GCGGATACCG GTGCGCTCCA TGACAAGGGC
GAGGCGCTTG CGGGTGCGGC ACCCGGTCTG GATCCCGCGC AAACGAAGAG CGGGCGCGGG
CTGGCTGTGT CGCTGTTGCT CGCCCTTGGC GGATTGGTGC TGGTTGTGGT CGGTGGCGCG
GCCCTGGTGA ACGGTGCGGT CGCCCTCGCG CGGAGCTTTG AGATCTCGGA AACCGTGATT
GGCCTGACGA TCGTGGCAGT CGGCACCTCA ATGCCCGAGC TTGTGACCTC GGTGATTGCC
GCGCTGAAGC GTCAGGGCGA TGTGGCCTTT GGCAATGTGG TCGGCTCCAA CATCTACAAC
ATCCTTGGCA TTGGCGGCAC GACGGCGCTG ATTGCCCCTT CTGATCTGCC GGGCGACATC
CTGCGGTTTG ATGCGCCAGT GATGATCCTC GTCTCCGCCG GATTCGTGCT GTTTGCAGCC
ACCGGCTTTC GCGTGGGGCG TCGAGAAGGC GCGATCCTGC TGGCGGGCTA TGGGCTCTAC
ATCTGGATGA TCTGGCCGCA ATAA
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| Protein sequence | MLEIGLLLVV GLALLMVGGD LLVRGAVQAA ARLGVSPLVI GLTLVGFGTS TPELVTSVQA
GLSGAPGIAY GNVVGSNIAN ILLIAGISAL LCPIIVARAA LRRDAVVMLL AALVFSGLAA
VWPMGRLSGA ALIIAMIGYI TFVVRQERQN ADTGALHDKG EALAGAAPGL DPAQTKSGRG
LAVSLLLALG GLVLVVVGGA ALVNGAVALA RSFEISETVI GLTIVAVGTS MPELVTSVIA
ALKRQGDVAF GNVVGSNIYN ILGIGGTTAL IAPSDLPGDI LRFDAPVMIL VSAGFVLFAA
TGFRVGRREG AILLAGYGLY IWMIWPQ
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