Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3159 |
Symbol | |
ID | 4075329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 139953 |
End bp | 140921 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004662 |
Product | hypothetical protein |
Protein accession | YP_611395 |
Protein GI | 99078137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAGT ATACGGTTAC AGCGTTCAGG TGGTCAGGAA CTGGGTATAA CGCCCAGTAC AATACATCCT ACACAGCGGT CATCACCGAT GACGACGCTT TTCTGAACGG CAATGGCGAT AGCAACGAAA CCGTCAGCAT TGACGGCGGG CCCTCCTATG TGACCAACGG GGCTCCGTAT GACATTAATG TCTCCTTTAC CGACACCAGC GGCACTCCTC ATGTGGAGAC CTTCTATTTT TTCAATGTAA ACAACAGCTG GTATTTCATC CCCGGGCCGG GATCGGCCTT TACCGAGGGG GCGACGCTCG GCAGCTATCA GAGCCACACC ACCGCGCCGA CACTCTACAG CACGATCACC TGCTTTGTGC GCGGCACCCT GATCGAGACG CAAAACGGCC TGATGCCGGT CGAGATGCTG CGCCCGGGCA CCATGGTGCG CACCAGCGAC GGCAGCTTCA AACCGCTGCG CCTGCCCATG AGTCGCAAGA TCCGGCCAGC AGAGCTGCGC GCCAACCCCA AGCTCGCTCC GGTGCGGATC GTGGCGGGTG CCTTGGGCAA CGGCCTGCCA AAACGCGATC TTCTCGTTTC GCGCCAGCAT CGCATGCTGG TGTCTTCGAA AATCTGCGAA CGCATGTTTG GCCAGACCGA TGTGCTGTTG GCGGCGCACC AGCTCACCGT TTTGCCGGGG ATCTTTGAAG ACAACACACA AGAGGATGTG GAATATTTCC ACCTTGTCTT TGATCGCCAC GAGGTGATTT TTGCCGAAGG CGCGCCGACC GAGAGTTTCT TCCCCGGGCC CGAGGCGATC AAGGCAATGC CTGCCGAGGC GCGCGCGGAA ATCCTGGCGA TCTTTCCGCA GATCCAGACC TGGGGTTTTG TCCCTGAGCC CGCGTTTCAG ATCCCAACGG GCAAGTTGCA GCGCAAGCTG GTGGCGCGTC ATCTCAAGAA CAATCGCCCG CTGCTCTGA
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Protein sequence | MAQYTVTAFR WSGTGYNAQY NTSYTAVITD DDAFLNGNGD SNETVSIDGG PSYVTNGAPY DINVSFTDTS GTPHVETFYF FNVNNSWYFI PGPGSAFTEG ATLGSYQSHT TAPTLYSTIT CFVRGTLIET QNGLMPVEML RPGTMVRTSD GSFKPLRLPM SRKIRPAELR ANPKLAPVRI VAGALGNGLP KRDLLVSRQH RMLVSSKICE RMFGQTDVLL AAHQLTVLPG IFEDNTQEDV EYFHLVFDRH EVIFAEGAPT ESFFPGPEAI KAMPAEARAE ILAIFPQIQT WGFVPEPAFQ IPTGKLQRKL VARHLKNNRP LL
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