Gene TM1040_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3093 
Symbol 
ID4075540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp62120 
End bp62554 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content60% 
IMG OID638004595 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_611329 
Protein GI99078071 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA GCACCATGGA TGACAGCCCC GCAGCGCTTG CCGCGACACA TCGCGCCGCC 
TTTACGCAGT CCCGCCCCTG GACGGAAGCT GAGTTTGGCG ACCTTCTGTC GGATCGTTTC
ACATATCTGA CCGGGGATGC GCGCGCCTTT GCCGTGGTGC GTGAAATCGC GGGCGAGGCA
GAGCTGCTCA CCATCGCAAC GCATCCGGAT GAACAGCGAC AGGGCCATGG GCGCAAGATC
ATGCAGATGT GGATGCATAA CGCAGCGACA CGCGGCGCCA CAGACGCTTT TCTTGAGGTC
GCACAAGACA ACCTTGCCGC GCAAGCGCTA TACTCGGCTT GCGGATTCGG CCTTGTCGGG
ATTCGAAAGG CCTATTATCC GCGACCAGAA GCTGAAGCGG CGGATGCCTT GCTCATGAAA
CGGGAACTTC CTTAA
 
Protein sequence
MTDSTMDDSP AALAATHRAA FTQSRPWTEA EFGDLLSDRF TYLTGDARAF AVVREIAGEA 
ELLTIATHPD EQRQGHGRKI MQMWMHNAAT RGATDAFLEV AQDNLAAQAL YSACGFGLVG
IRKAYYPRPE AEAADALLMK RELP