Gene TM1040_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3046 
Symbol 
ID4075140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp15109 
End bp15927 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID638004547 
Producthypothetical protein 
Protein accessionYP_611282 
Protein GI99078024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGAA CCTCACAATG GCTGACCTGC GTCTTTGTCG CGATCAGCTG GGGCTACGCC 
GCCGCAGCGC AATCGGTCTG CGAGGGCGCA GTTGTCTTTC AATGCGCAAC AGAGGCCGCC
GAGCTGCGCG AGCAAATCAC CGTCTGCGCC AAGGATCAAA GCTACAGCCT GACCCGGCAT
GCCTTGTCGA CCGGCGAGAT GTATTACGAC ACGCCTCTGA TCGCAGATGC CAACACGACC
TGGTTTCTCT GGTCCGAAGA GGATCAGGTC CAACTGGAGA TCGGGTTCTG GAGCACTGAT
CTTGCAGAGC CTGTGACCTT GCATGCGCAG CTGCCTTGGG ATGATGCAAA CGAAACCATC
GCGGATACGG GCGAGTATTC CATGTGGCTA CAGTCACCGC ATTGGCGCGC GGAAGTCGAT
CAAACGCTCT GTGCGCCGGC CACGATTTAC GCCGATACCG ACGCACTCTG GCCCGCACAA
GAAATGCGTG GCCCAATTGG GGCGTTCTTT TCCAAGGATG CTATCATCCC CCGCGTTGAA
ACTGCGGGAC GCGCGCGCGT CCTCTCCACC AAGGGGGGCC GTGAGGGTGT ACCCGTTTAT
GCGGCCGCGC GCCCCTCGGC CGCAACGCCG GTCTGGTGGA TGCTACAACC GGGCGAGACG
GTCGACCTCT TGGACCGCGT CGGCGATTTC GTCGCGGTTG CCTTGCCAAC CAATGGAATG
AGCGACTGCA CCCTGCGCCC GGAGCGCCTC GGGCAGCCCT ATGCCGGTCC CTGCGCGACG
GGATGGGTCG ATGCAGCCCT GCTGGAGCGG GTTCAATAA
 
Protein sequence
MSRTSQWLTC VFVAISWGYA AAAQSVCEGA VVFQCATEAA ELREQITVCA KDQSYSLTRH 
ALSTGEMYYD TPLIADANTT WFLWSEEDQV QLEIGFWSTD LAEPVTLHAQ LPWDDANETI
ADTGEYSMWL QSPHWRAEVD QTLCAPATIY ADTDALWPAQ EMRGPIGAFF SKDAIIPRVE
TAGRARVLST KGGREGVPVY AAARPSAATP VWWMLQPGET VDLLDRVGDF VAVALPTNGM
SDCTLRPERL GQPYAGPCAT GWVDAALLER VQ