Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3046 |
Symbol | |
ID | 4075140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 15109 |
End bp | 15927 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004547 |
Product | hypothetical protein |
Protein accession | YP_611282 |
Protein GI | 99078024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGAA CCTCACAATG GCTGACCTGC GTCTTTGTCG CGATCAGCTG GGGCTACGCC GCCGCAGCGC AATCGGTCTG CGAGGGCGCA GTTGTCTTTC AATGCGCAAC AGAGGCCGCC GAGCTGCGCG AGCAAATCAC CGTCTGCGCC AAGGATCAAA GCTACAGCCT GACCCGGCAT GCCTTGTCGA CCGGCGAGAT GTATTACGAC ACGCCTCTGA TCGCAGATGC CAACACGACC TGGTTTCTCT GGTCCGAAGA GGATCAGGTC CAACTGGAGA TCGGGTTCTG GAGCACTGAT CTTGCAGAGC CTGTGACCTT GCATGCGCAG CTGCCTTGGG ATGATGCAAA CGAAACCATC GCGGATACGG GCGAGTATTC CATGTGGCTA CAGTCACCGC ATTGGCGCGC GGAAGTCGAT CAAACGCTCT GTGCGCCGGC CACGATTTAC GCCGATACCG ACGCACTCTG GCCCGCACAA GAAATGCGTG GCCCAATTGG GGCGTTCTTT TCCAAGGATG CTATCATCCC CCGCGTTGAA ACTGCGGGAC GCGCGCGCGT CCTCTCCACC AAGGGGGGCC GTGAGGGTGT ACCCGTTTAT GCGGCCGCGC GCCCCTCGGC CGCAACGCCG GTCTGGTGGA TGCTACAACC GGGCGAGACG GTCGACCTCT TGGACCGCGT CGGCGATTTC GTCGCGGTTG CCTTGCCAAC CAATGGAATG AGCGACTGCA CCCTGCGCCC GGAGCGCCTC GGGCAGCCCT ATGCCGGTCC CTGCGCGACG GGATGGGTCG ATGCAGCCCT GCTGGAGCGG GTTCAATAA
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Protein sequence | MSRTSQWLTC VFVAISWGYA AAAQSVCEGA VVFQCATEAA ELREQITVCA KDQSYSLTRH ALSTGEMYYD TPLIADANTT WFLWSEEDQV QLEIGFWSTD LAEPVTLHAQ LPWDDANETI ADTGEYSMWL QSPHWRAEVD QTLCAPATIY ADTDALWPAQ EMRGPIGAFF SKDAIIPRVE TAGRARVLST KGGREGVPVY AAARPSAATP VWWMLQPGET VDLLDRVGDF VAVALPTNGM SDCTLRPERL GQPYAGPCAT GWVDAALLER VQ
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