Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3031 |
Symbol | rpsT |
ID | 4076604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3200122 |
End bp | 3200385 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638008360 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_615025 |
Protein GI | 99082871 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.362644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.541677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACT CTCCTCAGGC TAAGAAGCGC GCACGTCAGA ACGAAAAGCG CTTTGCCATC AACAAAGCTC GTCGTTCGCG CATCCGCACT TTCCTGCGTA AAGTTGAAGA AGCCATCGCA TCCGGTGACA AAGAAGCAGC GACCGCAGCT CTGCGTGCCG CACAGCCTGA ACTGATGCGC GGTGTGACCC GCGGCGTTTA CCACAAAAAC ACCGCTTCCC GCAAAATTTC GCGCCTGGCC GCACGCGTAA AAGCACTCGG CTAA
|
Protein sequence | MANSPQAKKR ARQNEKRFAI NKARRSRIRT FLRKVEEAIA SGDKEAATAA LRAAQPELMR GVTRGVYHKN TASRKISRLA ARVKALG
|
| |