| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3007 |
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| Symbol | |
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| ID | 4076580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3175510 |
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| End bp | 3177198 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008336 |
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| Product | urocanate hydratase |
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| Protein accession | YP_615001 |
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| Protein GI | 99082847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.237465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CCCGCAAGAA TACCCGTGAC ATTTTCCCTG CCACTGGCAC CGAGATCACT
GCGAAGTCCT GGTTGACGGA GGCTCCGATG CGGATGCTGA TGAACAACCT GCACCCCGAT
GTGGCTGAAA ACCCGCATGA GCTCGTGGTT TATGGCGGGA TTGGCCGGGC GGCACGCACG
TGGCAGGATT TCGACCTCAT CGTCGAGACC CTCAAGACTC TTGAAGAAGA TCAGACCCTG
ATGGTGCAGT CCGGCAAACC CGTCGGCGTC TTTCAGACCC ACAAGGACGC GCCGCGCGTG
TTGATCGCCA ACTCCAACCT CGTGCCGCAT TGGGCCAATT GGGATCACTT CAACGAGCTC
GATAAGAAGG GTCTGATGAT GTACGGCCAG ATGACCGCTG GTTCGTGGAT TTACATCGGC
ACCCAGGGCA TCGTGCAGGG CACCTATGAG ACCTTTGCCG AGGCGGGCCG TCAGCACTAT
GGCGGGGACC TGACGGGAAA ATGGATCCTC ACCGGCGGTC TTGGGGGGAT GGGGGGGGCG
CAGCCTTTGG CTGCGGTTTT TGCTGGTGCT TGCTGCCTTG CGGTGGAGTG CAACCCCGAC
TCGATCGATT TCCGCCTGCG CACCAAATAC CTTGATGAGA AGGCTGAAAC GCTGGACGAA
GCGCTGGAGA TGATTGAGCG TTGGACCAAG GCGGGCGAGG CCAAATCCGT TGGCCTTTTG
GGCAATGCGG CGGATGTGTT TGCAGAGCTT GTGGAGCGTG CGAAGGCGGG TGGCATGCGC
CCCGACATCG TGACGGATCA GACCTCAGCG CATGACCCGG TCAACGGTTA TCTGCCGCAA
GGCTGGACGA TGGCCGAATG GAGAGAGAAG CGCGAAACGG ACAAAAAGGC GGTTGAGAAA
GCCTCTCGGG CGTCGATGAA GGCTCATGTG AAGGCCATGG TGGATTTCCA CGAGATGGGG
ATTCCCACCG TCGATTATGG CAACAACATC CGTCAAGTCG CGCTGGAAGA GGGGCTGGAG
ACGGCGTTCT CATTCCCCGG ATTTGTGCCA GCCTACATTC GCCCGCTGTT CTGCAAGGGG
ATCGGTCCCT TCCGTTGGTG TGCGCTCTCG GGGGATCCCG AGGATATCCG CAAGACCGAT
GCCAAGATGA AAGAGCTGTT CCCGGAGAAC GAGAGCCTGC ACCGCTGGCT CGACATGGCG
CAGGACCGCA TCGCCTTTCA GGGGCTACCG GCGCGGATCT GCTGGATCGG CCTTGGAGAT
CGCCACAAGG CGGGGCTTGC CTTCAACGAA ATGGTGCGCA ACGGCGAATT GTCGGCGCCG
GTCGTGATTG GCCGAGATCA TCTTGACTCG GGTTCCGTGG CATCGCCCAA CCGTGAAACC
GAAGCGATGA TGGATGGATC GGATGCGGTC TCTGACTGGC CATTGCTCAA TGCGCTTTTG
AACACGGCCT CGGGCGCGAC ATGGGTTTCG CTGCATCATG GCGGCGGTGT TGGCATGGGG
TTTTCGCAGC ACTCTGGCGT GGTGATCTGC TGTGACGGCA CAGAGGATGC AGATCGCCGG
ATCGGGCGCG TTCTGTGGAA CGACCCGGCG ACCGGCGTAA TGCGTCACGC AGACGCAGGC
TATGAGATCG CGAAGGACTG CGCCAAAGAG CACGGATTGA ACCTGCCCGG TATCCTGCGC
TCGGAATGA
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| Protein sequence | MSDPRKNTRD IFPATGTEIT AKSWLTEAPM RMLMNNLHPD VAENPHELVV YGGIGRAART
WQDFDLIVET LKTLEEDQTL MVQSGKPVGV FQTHKDAPRV LIANSNLVPH WANWDHFNEL
DKKGLMMYGQ MTAGSWIYIG TQGIVQGTYE TFAEAGRQHY GGDLTGKWIL TGGLGGMGGA
QPLAAVFAGA CCLAVECNPD SIDFRLRTKY LDEKAETLDE ALEMIERWTK AGEAKSVGLL
GNAADVFAEL VERAKAGGMR PDIVTDQTSA HDPVNGYLPQ GWTMAEWREK RETDKKAVEK
ASRASMKAHV KAMVDFHEMG IPTVDYGNNI RQVALEEGLE TAFSFPGFVP AYIRPLFCKG
IGPFRWCALS GDPEDIRKTD AKMKELFPEN ESLHRWLDMA QDRIAFQGLP ARICWIGLGD
RHKAGLAFNE MVRNGELSAP VVIGRDHLDS GSVASPNRET EAMMDGSDAV SDWPLLNALL
NTASGATWVS LHHGGGVGMG FSQHSGVVIC CDGTEDADRR IGRVLWNDPA TGVMRHADAG
YEIAKDCAKE HGLNLPGILR SE
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