Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2939 |
Symbol | |
ID | 4077090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3108809 |
End bp | 3110077 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638008268 |
Product | hypothetical protein |
Protein accession | YP_614933 |
Protein GI | 99082779 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.490439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTT CCTCCTCGCT GAATGCTGGA GTAGCAGGGC TCGCCGCGAA TTCAACTCGT TTGGCAGCCA TTTCCGATAA CATCGCGAAC TCCTCGACAG CCGGCTACAA GCGTGTTGTG ACCTCATTTG AATCCATGGT CATTTCCCAA TCCGGCGGCC GCTACGCAGC AGGTGGCGTC TCCGTCAACA ACACGCGCAT GATTGACGAG CGCAGCTCCC TGATCTCCAC CAGCAACGCC ACCGATCTCG CCGTTGCAGG CCGTGGCTTC CTCCCGGTCG CAAGCTTGGC CGAAGTGAAG GCAGGTGAAG ATCCGAACAT GCTTCTGACC ACCTCCGGCT CCTTCCGCAC CAATGACGAA GGGTATCTGA CAACAAGCTC CGGTCTGGTG CTGCTGGGTT GGCCCGCGAA TTCCGATGGA ACACTCCCCA GCGTCGCGCG CGACACGGAT GATCCGCTCG AGCCCATCAG ATTTGATACT GCACAGCTGA GTGCGGCCCC GACCACTGCA GTGAGCCTGG GTGTAAACCT GCCTGCAAGC AGCGCTGTGA CAGGTGCCGC TGGGGCGGCT GAAGAAAACA CCATCCAATA TTTTGACAAC CTCGGCGGTC AACAGGATCT GAACATCGTC TACACCCCAA CCGGGGCTGC GGACAACGAG TGGACCATGA CCCTCACCGA TGGTGTCACA GGCACCGTGG TTGGGGACTA CACGTTGACG TTTGACGACT CCGTGACGGG CAAAGGGACG CTCTCTACCG TCACGACCAC AACCGGTGGC GCCTATGATC CTGCGACTGG CGCCATAATA GTCACCACTG ATAGCGGTCC AATAGAGATT GAAATCGGCG TGATGACGCA GCTTGCCAGC TCTTTCTCTG CCGCGACCAT CGAAAAAGAT GGCTATGAAG CGGCAAGCTT TGCGGGTGTT GAAGTGGACG AGGGTGGCTA TGTGCATGCG CTCTATGAAA ACGGCAGCAG TCGCATCGTT TACCAGATCC CGCTTGCGGA TATGCCAAAT GCCAATGGGA TGCGGTCTCT GGACAGCCAG ACCTTCATGC CCTCCCCTGA CAGTGGTGCG TACTACCTCT GGGATGCGGG CGCCGGGCCG ACTGGAACAG TGGCCAGCTA CCGTCAGGAG GAATCCGGCA CCGATGTTGC TTCTGAATTG ACCACGATGA TCCAGACCCA GCGGGCCTAT TCGTCGAACG CAAAGGTCAT TCAGACTGTG GATGAGATGC TTCAGGAAAC GACCAACATT AAGCGCTGA
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Protein sequence | MTISSSLNAG VAGLAANSTR LAAISDNIAN SSTAGYKRVV TSFESMVISQ SGGRYAAGGV SVNNTRMIDE RSSLISTSNA TDLAVAGRGF LPVASLAEVK AGEDPNMLLT TSGSFRTNDE GYLTTSSGLV LLGWPANSDG TLPSVARDTD DPLEPIRFDT AQLSAAPTTA VSLGVNLPAS SAVTGAAGAA EENTIQYFDN LGGQQDLNIV YTPTGAADNE WTMTLTDGVT GTVVGDYTLT FDDSVTGKGT LSTVTTTTGG AYDPATGAII VTTDSGPIEI EIGVMTQLAS SFSAATIEKD GYEAASFAGV EVDEGGYVHA LYENGSSRIV YQIPLADMPN ANGMRSLDSQ TFMPSPDSGA YYLWDAGAGP TGTVASYRQE ESGTDVASEL TTMIQTQRAY SSNAKVIQTV DEMLQETTNI KR
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