Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2905 |
Symbol | |
ID | 4078583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3072985 |
End bp | 3073425 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638008234 |
Product | MarR family transcriptional regulator |
Protein accession | YP_614899 |
Protein GI | 99082745 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.607898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGA AGCATTCCCT TGCGATTTCG CTCTTCAGCG AGATTCTTAT GGCGGACCAA TTGGCCCGTG CTCGGCTGAG CAAGGCTCTG CCCAAAGGGA TGGAGCTTTC GCATTTTTCT GTACTCAATC ATCTGACACG CGCGGGACTT GAGCGTTCTC CGGCGCAGTT GGCGAAAACA TTTCATGTGA CTCGCGGCGC GATGACCAAC ACGATCTACA AGCTCGAAGT TGCAGGGTTT GTGCATGTGC GCCCGGATTG GGATGATGCG CGCCGTAAAA TGGTGGCCAT CAGCCCCGCA GGCCGCAAAG CGCGGGATGC TGCGCTTGCC TCGATCATTC CGATGATTTC CGAAGTCGTG AGCGAATTGG GCGGAGACCG TGTGCGCGCT GCGCTTCCTA TCTTGCGCGA GTTTCGTGGC AAGCTTGAGG TCGGAGAGTG A
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Protein sequence | MDEKHSLAIS LFSEILMADQ LARARLSKAL PKGMELSHFS VLNHLTRAGL ERSPAQLAKT FHVTRGAMTN TIYKLEVAGF VHVRPDWDDA RRKMVAISPA GRKARDAALA SIIPMISEVV SELGGDRVRA ALPILREFRG KLEVGE
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