Gene TM1040_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2905 
Symbol 
ID4078583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3072985 
End bp3073425 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID638008234 
ProductMarR family transcriptional regulator 
Protein accessionYP_614899 
Protein GI99082745 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.607898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA AGCATTCCCT TGCGATTTCG CTCTTCAGCG AGATTCTTAT GGCGGACCAA 
TTGGCCCGTG CTCGGCTGAG CAAGGCTCTG CCCAAAGGGA TGGAGCTTTC GCATTTTTCT
GTACTCAATC ATCTGACACG CGCGGGACTT GAGCGTTCTC CGGCGCAGTT GGCGAAAACA
TTTCATGTGA CTCGCGGCGC GATGACCAAC ACGATCTACA AGCTCGAAGT TGCAGGGTTT
GTGCATGTGC GCCCGGATTG GGATGATGCG CGCCGTAAAA TGGTGGCCAT CAGCCCCGCA
GGCCGCAAAG CGCGGGATGC TGCGCTTGCC TCGATCATTC CGATGATTTC CGAAGTCGTG
AGCGAATTGG GCGGAGACCG TGTGCGCGCT GCGCTTCCTA TCTTGCGCGA GTTTCGTGGC
AAGCTTGAGG TCGGAGAGTG A
 
Protein sequence
MDEKHSLAIS LFSEILMADQ LARARLSKAL PKGMELSHFS VLNHLTRAGL ERSPAQLAKT 
FHVTRGAMTN TIYKLEVAGF VHVRPDWDDA RRKMVAISPA GRKARDAALA SIIPMISEVV
SELGGDRVRA ALPILREFRG KLEVGE