Gene TM1040_2856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2856 
Symbol 
ID4076390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3026553 
End bp3027050 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID638008185 
ProductFxsA cytoplasmic membrane protein 
Protein accessionYP_614850 
Protein GI99082696 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.596074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.72438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTT TTCTGGCTTT TCTGCTGGTT CCAATCATTG AAATCGCCCT GTTTATACAG 
GTTGGCGGTC TGATTGGTCT TTGGCCAACG CTCGGGATCG TCGTTTTGAC GGCATTTTTG
GGGACCTGGC TGGTGAAAAC CCAGGGTCGG CTGGCGCTTG GACAGCTGCG TGGGTCGTTT
GAACGTCTTT CCGACCCGAC GGAGCCGCTC GCGCATGGCG CAATGATCCT GCTTGCCGGT
GCGCTTTTGC TCACGCCTGG TTTTTTTACC GACGCTTTCG GCTTTTTGCT TCTGGTTCCC
GGTTTTAGGA CCCGCGCCTT TGCCTACCTG AGAACCAAGG TGACCGTCGC CTCCTTTCAG
ATGGGGCAAG ATCCGCGCCA GCATCCTCAA CACCCTCGCA AAAGTCCGCA GGGTGACGTC
ATTGACGGCG ATTACGAGGA TGTAACGCCG CGTCCGCGCA ATGAGGGGCC ATCAGGTTGG
GTGGAAGGTC CGAAATAA
 
Protein sequence
MPLFLAFLLV PIIEIALFIQ VGGLIGLWPT LGIVVLTAFL GTWLVKTQGR LALGQLRGSF 
ERLSDPTEPL AHGAMILLAG ALLLTPGFFT DAFGFLLLVP GFRTRAFAYL RTKVTVASFQ
MGQDPRQHPQ HPRKSPQGDV IDGDYEDVTP RPRNEGPSGW VEGPK