Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2855 |
Symbol | |
ID | 4076389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3025782 |
End bp | 3026438 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638008184 |
Product | import inner membrane translocase, subunit Tim44 |
Protein accession | YP_614849 |
Protein GI | 99082695 |
COG category | [S] Function unknown |
COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.37899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.341252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCGC CCTTGATTGA GCTTTTGGTC CTAGCTGGCA TCGCGGTTTT TCTGATCCTG CGCCTAAAAA GCGTTCTGGG CACACGTGAA GGGTTTGAAA AGCCCCCGCT TGCCAGCAGC GAAACACGCG CCCCGCAGCG CAAGTTTGAG GTGATCGAGG GCAGCCCCGA CGATGACATC ATCGCGTATG TCGACGAAGG CAGCCCGCAG TCAAAGGCGC TGAGCGATAT GAAACGCTCG GATTCTTCCT TCCAGGTGGC CGAGTTCGTG CAGGGTGCCC GTGGCGCCTA TGAGATGATC TTGATGGGGT TCGAAACCGG TGAGCTAGAC GGTATTCAGC CGTTTATTTC TGATGATATC TTCCAGAGCT TTGTTGACGC AGTGTCCGCG CGTGAAGATC AGGGGTTGAC CATCGAGGCA GAATTCATCG GTGTGCGCGA GACGAGCATC ATCGACGCCA CCTTTGACAC AGCGACCTCT ACAGCAGAAA TCACTGTGCG CTTTGTCGGT GAGCTGACCT CGGCCGTGCG CAACCGCGCG GGTGAAATCG TGGAAGGTGA CCCCAAAGCC GTGAAGCGGC AGAAGGACAC TTGGACCTTC TCGCGCCAGA TGGGCACCGG CGACCCGAAT TGGCTGCTGG TGGCAACGGA CGCATGA
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Protein sequence | MESPLIELLV LAGIAVFLIL RLKSVLGTRE GFEKPPLASS ETRAPQRKFE VIEGSPDDDI IAYVDEGSPQ SKALSDMKRS DSSFQVAEFV QGARGAYEMI LMGFETGELD GIQPFISDDI FQSFVDAVSA REDQGLTIEA EFIGVRETSI IDATFDTATS TAEITVRFVG ELTSAVRNRA GEIVEGDPKA VKRQKDTWTF SRQMGTGDPN WLLVATDA
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