Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2838 |
Symbol | |
ID | 4076657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3006131 |
End bp | 3006685 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008167 |
Product | response regulator receiver protein |
Protein accession | YP_614832 |
Protein GI | 99082678 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.787784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG CAGTTCAGTC CGAGATCGGA CCTGATCCCT CGCTCCTCTT GGTGGATGAC GATGAACCGT TTCTGCGCCG CCTTGCAAAA GCGATGGAGA AACGCGGCTT TGCAGTGGAG ACAGCCGATT GCGTTGCTGC GGGTCAGGCT ATTGTCTCGG CACGTCCGCC AGCATATGCG GTTGTGGATC TGCGGCTTGA GGATGGCAAT GGGCTCGATG TCGTCGAAGT CCTGCGGGAA AAACGCCCCG ACAGCCGCAT CGTCGTCCTG ACCGGGTATG GCGCAATTGC AACGGCTGTT GCTGCAGTCA AGATTGGTGC GACCGATTAT CTGTCGAAGC CCGCGGATGC GACGGACATT ACCAATGCTC TTCTGGCTGG TGATGACGCA TTGCCCCCGC CCCCTGAAAA CCCGATGAGC GCTGATCGTG TCCGCTGGGA ACATATCCAG CGCGTGTATG AGCTCTGCGA TCGGAACGTG TCTGAAACAG CGCGGCGTTT GAATATGCAC CGTCGGACCC TGCAACGCAT CCTAGCCAAG CGCAGCCCAA GGTAA
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Protein sequence | MAEAVQSEIG PDPSLLLVDD DEPFLRRLAK AMEKRGFAVE TADCVAAGQA IVSARPPAYA VVDLRLEDGN GLDVVEVLRE KRPDSRIVVL TGYGAIATAV AAVKIGATDY LSKPADATDI TNALLAGDDA LPPPPENPMS ADRVRWEHIQ RVYELCDRNV SETARRLNMH RRTLQRILAK RSPR
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