| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2723 |
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| Symbol | |
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| ID | 4077030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2866340 |
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| End bp | 2866897 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008048 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_614717 |
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| Protein GI | 99082563 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAC AAAGCGCCAA GGCTGAATTG ACCAGCCATA TGAAGGTGCT GCGCGCCTTC
GCCATGAGCC TGACCCGCAA TGATGCGGCG GCGGATGATC TTGTACAGGA CACGGTTCTC
AAAGCGTGGA GCAACCTCGA CAAGTTTCAG GAAGGCACCA ACATGCGCGC CTGGCTCTTC
ACCATCCTGC GCAACACCTT TTACTCAGGC CGCCGCAAGG CAGTAAGAGA GGTGGAGGAT
TCCACCGGCA GCATCACCGA GAGCCTTTCG GTCAAACCCG CTCATGACGG ACGTCTGCAA
CTGGAAGAGT TCCGGCGCGC CTTGGGTGAA TTGCCCGTGG AACAGCGCGA AATCCTGACT
CTGATCGGAG TGCTGCAATA TTCCTACGAA GAGGCCGCCG AGGTCTGTGG CGTCAAGGTG
GGCACCGTCA AAAGCCGTCT CAACCGGGGC CGTGAGGCGC TTGCAGCCAA GATGCAGTTG
GATGCGAATG AGCAGTTGGA ACTGACCGAT GCTGCCACCC ACGCGGTTGT TGCAGCCAAC
AATGGGACTG CCGCGTGA
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| Protein sequence | MDRQSAKAEL TSHMKVLRAF AMSLTRNDAA ADDLVQDTVL KAWSNLDKFQ EGTNMRAWLF
TILRNTFYSG RRKAVREVED STGSITESLS VKPAHDGRLQ LEEFRRALGE LPVEQREILT
LIGVLQYSYE EAAEVCGVKV GTVKSRLNRG REALAAKMQL DANEQLELTD AATHAVVAAN
NGTAA
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