| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2688 |
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| Symbol | |
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| ID | 4077599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2827522 |
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| End bp | 2828361 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008013 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_614682 |
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| Protein GI | 99082528 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.292579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATA GGGGTCTATA CCCCTGCCGC TTTCCCGTCT ATGTTTTTAT CATGATAAAA
GAGCGGCAGG TGATGAGTAA CAAGAGCAGA ACGCCCGAAC AGCCCAAACG CTCCCGCCCG
GTGCGGGTCG CCGAAGAAAT CAAGACCTGG GTGGTCGAAC GCGATCTCCA GCAGGGGGAC
AAGCTCCCCA ACGAGACGGA GATGATCGCG CAATTCGGCG TCTCCAAGGG GACCGTGCGC
GAGGCCATGC GCATCCTCGA AGCGCAGGGT CTCATCATCA CCCGCACCGG ACCGGGGGGC
GGCAGCTTTG TCGACAAGGT CTCGGCCGAG CGGGCGCGCT CGCTTCTGGC GAATTACTTC
TATTTTCAGA ATCTTTCGAT TGCGGACATC TATCAGATGC GCCGCGCGCT GGAGCCGGAA
CTGGCGGCAA GCCTCGCAGG CCAACTGGAT GAGGCGCAGC TTGGGGAAAT GGAATCCCTC
GCCGCACGCT ATCCGGAGCC AGCGCAATCC GCCGAGGAAG AGAAGGAGCA GCATATCGCG
TCGCTCGAAT TCCACGCCCG GCTGGCGGAA TTTTCGGGCA ATGCGCTGTT GGGGTTTGTG
ATTTCCTTCA TGGCGCGGGT GCTTACGGAT ATGACCATCT ATCGCAAGCT CTACGATCCC
CCCAACCTGG AGCTCTGGCG GCGAGGACGG GCGCACCAGA TGCAACTGGT GCAAGCTCTG
CGCGATGGGG ATGCGGCAGC GGCGCGCCGG ATCATGGCCT CGCATATGCA GGGCGCAGAG
GAGCAGATGC GCTCACAAGA GGCGCAACTG GCGCGCCGAT TCATTGGCGA ACAGCGTTAG
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| Protein sequence | MMNRGLYPCR FPVYVFIMIK ERQVMSNKSR TPEQPKRSRP VRVAEEIKTW VVERDLQQGD
KLPNETEMIA QFGVSKGTVR EAMRILEAQG LIITRTGPGG GSFVDKVSAE RARSLLANYF
YFQNLSIADI YQMRRALEPE LAASLAGQLD EAQLGEMESL AARYPEPAQS AEEEKEQHIA
SLEFHARLAE FSGNALLGFV ISFMARVLTD MTIYRKLYDP PNLELWRRGR AHQMQLVQAL
RDGDAAAARR IMASHMQGAE EQMRSQEAQL ARRFIGEQR
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