Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2683 |
Symbol | |
ID | 4077594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2821249 |
End bp | 2822205 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008008 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_614677 |
Protein GI | 99082523 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0158942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG CACTGAAACT CACCAACCTC AGCAAGACCT TCCCGGTGGG CAAACGCCTG TTCGGCGGAG CCAAGGCGGG CGTCAAGGCG GTGCAGCCGC TCTCGCTGAC GGTGGAACAG GGCGAAACCC TCGGCATCGT GGGGGAGTCG GGGTGTGGCA AATCCACATT GGCGCGGATG CTGGTGGGCT TGCTGCCGCC GACAACCGGC CAGATCGAGC TCGAAGGCGC ACCGCTTGAT AATGCGGACC CGGCCACCTT TGGGCAGAAG ATCCAATATG TGTTTCAGGA CCCGATCAGC AGCCTCAACC CGCGCAAAAC CATTCGCCAG GTGATGGACG CGCCCCTGCG GCATCTGCAC GGTATGGATG CCAAGGCGCG CGCGGCGCGC ATCGCCGAGA TCTTTGCCGC CGTAAACCTG CGCGAAGAGT TTCTCGACCG CTACCCGCAT GAATTCTCCG GTGGTCAGGC CCAGCGGATT GGCATTGCCC GTGCCCTTGC GGCGGATGCG CGGATCCTGA TCCTTGATGA ACCTGTCTCG GCGCTGGATG TCTCGGTACA GGCGCAGGTG CTGAACCTCT TGGCGGATCT GAAGCGGACC TTCGGCCTGA CCTATATTTT CATCAGCCAC GATCTCGCGG TGGTGGAGGC GGTGAGCGAC CGTGTCGCGG TGCTCTATTT TGGCTCCGTG GTGGAGGTTG GTCCCGCCAA TGAGGTGTTT GCCGCGCCCC GACACCCCTA CACGCGGCTT CTGGCTCAAA GCGCCCCGGT GGTAGGCCGC GCTCTGGCCG CGCCCGAGGC CAAAGAGACC GAATTGCCGG ATCCTCTGAA CCCGCCCAAA GGCTGCGCTT TTGCGGCGCG CTGTGCCCTT GCGAGCGACC TTTGCCAAAG CACCGCCCCG ACGCTCGAGC CCCAGTCCGA TCGCGTCGCG GTCGCCTGTC ATCACCCCAT TGACTGA
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Protein sequence | MSAALKLTNL SKTFPVGKRL FGGAKAGVKA VQPLSLTVEQ GETLGIVGES GCGKSTLARM LVGLLPPTTG QIELEGAPLD NADPATFGQK IQYVFQDPIS SLNPRKTIRQ VMDAPLRHLH GMDAKARAAR IAEIFAAVNL REEFLDRYPH EFSGGQAQRI GIARALAADA RILILDEPVS ALDVSVQAQV LNLLADLKRT FGLTYIFISH DLAVVEAVSD RVAVLYFGSV VEVGPANEVF AAPRHPYTRL LAQSAPVVGR ALAAPEAKET ELPDPLNPPK GCAFAARCAL ASDLCQSTAP TLEPQSDRVA VACHHPID
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