Gene TM1040_2680 details

Gene Information

• Locus tag: TM1040_2680
• ID: 4077591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 2818500
• End bp: 2819261
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638008004
• Product: hypothetical protein
• Protein accession: YP_614674
• Protein GI: 99082520

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0318309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAAAC TACTGGAACG AGTGCTGAAC ACGGGCGCCT TGCGGCGCTG GCGCAGAGCT 
GCACGGGCGG CCCCCTCGAC GCCACTGGCA CGCTTGCGCC AACAGCGCAA TGATGCTCGC 
AAGCTGCGGA TGCATCTCGA TCAGCTGATC CATACCGCCG ACAACCGTCT GGCGCTGCCA 
AAGATCGACT CGTCATATTT CCCGCGCCCG CATGGTACCG ACTGGTCCTG GCGGCCCGAG 
CTCTGGCGCG GCCCATTGCC GGTGGCCGGT GTGTCCTCGG TGCCGAGCAA GACCCGGCTT 
GGCCATGAGA TCCAGATGTT TCACGACTGC GCCATCTCCG AGCTGACCCT GCGCCAACTG 
CGCAACACGC GCGAGGAGGA TCTGGCGCCC TACGGGTTGC GGATGGATGT GTTCAAGTTC 
GACGGCTCGT TCCTGTCGCT GGTGATCGAC CTGCCTGCCG AAGCCACGCA GGGGCTCACC 
CGGCAGCATC TGGTGCGGCT GGACTGCATT GCCGAGAGCG AAAAGCCGAT CGAAATCTTC 
GCCCGTCTCA ATATCAAACA CGGCCCCAAC ACCGAGCAGT TGGTGCGGGA GCTGCCGCCG 
GGCGAGAAAA CCTTCTCGGT GGAATATGAC CTGGCCTATT CGCGGCTCAA CGAAAAGCGC 
ATCGAGAAGG CCTGGATCGA TCTGATCTTT GAAGCGCCAG ACATGAACCA GGTGGTGCTG 
CGGGATCTGA CCTTTGCGCG TTTTCTGCGC GCCAACCTCT GA 

 

Protein sequence

MGKLLERVLN TGALRRWRRA ARAAPSTPLA RLRQQRNDAR KLRMHLDQLI HTADNRLALP 
KIDSSYFPRP HGTDWSWRPE LWRGPLPVAG VSSVPSKTRL GHEIQMFHDC AISELTLRQL 
RNTREEDLAP YGLRMDVFKF DGSFLSLVID LPAEATQGLT RQHLVRLDCI AESEKPIEIF 
ARLNIKHGPN TEQLVRELPP GEKTFSVEYD LAYSRLNEKR IEKAWIDLIF EAPDMNQVVL 
RDLTFARFLR ANL