Gene TM1040_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2668 
Symbol 
ID4077579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2803833 
End bp2804795 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID638007992 
Producthypothetical protein 
Protein accessionYP_614662 
Protein GI99082508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CTGTGGTACA ATCCAATGTA TTGGGCATCC TCGCCGCAAT TGGAGCGGCG 
GTGGCCTTTT CTGTCATTGA TGTCACCTTC AAGTTTCTCT CGGACGGCTA TCCGCTCTAC
CAGGTGGTTT TTATTCGCTC TGTGGTTGCG CTGGTGCTGC TGTTGGCGGT GATCATCCCG
CTCGAAGGCG GCGTGAAGAT CCTGCGCACG CAGAATATCC GCCTGCATGG TCTGCGGGTG
ACGGCCGTGG TCTTTGCCAA TATCACCTTT TTTTCCGGTC TGGCGGTGTT GCCGCTCGCC
GAGGCGGTGG CCATCGCCTT TGCCACGCCC TTGATTGTTA CCCTGCTGTC AGTGCTGTTT
CTCAAGGAGC GGGTCGGCCC GTGGCGCTGG GGCGCGGTGA TGGTGGGGTT CAGCGGCATT
CTGGTGATCG TAAAGCCCGG GATGGCGGCG TTTCAGCCCT ATGCGCTGCT GCCGTTTCTG
GGCTCTTGCG GCTATGCGAC GCTGCATATC CTGACCCGCC GGGCGGGCGG GTCGGACAAG
GCCGCGACGC TGTCGTTTTA TCCCACGCTT GGATTTTTGA TCGTAAGCGC GCTGGCGGGG
CTGGTGTTTG GGCATGGGCA GTGGGCCACC GGCGTGCCGC TTTGGGATGT GGTGCTCAAA
CCCTGGGCCT GGCCCAAGGG GATCGAATGG GTGATCTTTG CCGTCGCCGG GGTCTCTGGC
GCGGTGGGCG GCTATCTGGT CGGGCAGGCC TATCGGCTCT GTGAGGCAGG TCTGGTCGCA
CCCTTTGAAT ATGTCGCCAT GCCGCTGGCT GTGGTTTGGG GGGTACTGGT TTTTGCGGAA
TGGCCGGAAC CTTCGGTCTG GCTCGGCTCG GCCTTGATTA TCGGAGCGGG GCTTGTTTCT
CTTTGGAGAG AGACCCGCAC GCCCGGCCCG CCGCCGCGTC CGCGCCCGCG TTCCTCTGGC
TAG
 
Protein sequence
MSATVVQSNV LGILAAIGAA VAFSVIDVTF KFLSDGYPLY QVVFIRSVVA LVLLLAVIIP 
LEGGVKILRT QNIRLHGLRV TAVVFANITF FSGLAVLPLA EAVAIAFATP LIVTLLSVLF
LKERVGPWRW GAVMVGFSGI LVIVKPGMAA FQPYALLPFL GSCGYATLHI LTRRAGGSDK
AATLSFYPTL GFLIVSALAG LVFGHGQWAT GVPLWDVVLK PWAWPKGIEW VIFAVAGVSG
AVGGYLVGQA YRLCEAGLVA PFEYVAMPLA VVWGVLVFAE WPEPSVWLGS ALIIGAGLVS
LWRETRTPGP PPRPRPRSSG