| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2630 |
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| Symbol | |
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| ID | 4077933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2764013 |
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| End bp | 2765335 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007954 |
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| Product | ammonium transporter |
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| Protein accession | YP_614624 |
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| Protein GI | 99082470 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TGACAGTGAC ACTCGCCGCC ACGGCGCTGG CGACCCTGCC GGGTCTGGCC
TTCGCGCAGG AAGCCGCGGC CGAGACACCA GACATCAACC CTTATATCTT CACCACGCTC
CTGTTCCTGA TCGGCGGTTT CCTGGTGTTC TGGATGGCCG CAGGCTTTGC CATGCTCGAA
GCAGGGCTCG TGCGCTCCAA GAACGTGACC ATGCAGCTCA CCAAGAACGT GGCGCTCTTC
TCGATCGCCG CGATCATGTA CTGGCTCGTG GGCTTCAACC TGATGTATCC GGGTGATGGC
TGGATCATCC CGGGCGTGAT GGGGCCGCTC TTTGCCACCA CCTCGCTGGA GCCTGTGGGC
CTCGGTGCCG ACGCCGCAGC GCTGGATTAT GCTTCCGTGG GTTCGGACTT TTTCTTCCAG
CTGATGTTCT GCGCCACCAC CGCCTCCATC GTATCCGGCA CGCTGGCCGA GCGCATCAAG
CTGTGGCCCT TCCTGATCTT CGTCGCGATC CTGACCGGCG TGATCTACCC GATCGAGGCC
TCCTGGGTCT GGGGTGAGGG CTTCCTCGAT GGGCTAGGAT TCTCTGACTT TGCGGGCTCC
ACCCTGGTGC ATGCTGCTGG TGGCTTTGCG GCCCTCGCCG GTGCCCTGAT CCTCGGTCCG
CGGATCGGCA AATACAAAGA TGGCCGCACC ATTCCGATGC CCGGCTCCAA CCTCGCACTG
GCCACTCTGG GTACCTTCAT CCTGTGGCTC GGCTGGTTTG GCTTCAACGG TGGTTCGCAG
CTGGCGATGG GCACCGTGGG CGATGTGACC GACGTGTCGC GCATCTTTGC CAACACCAAC
ATGGCTGCCG CAGCCGGTGC TGTGACCGCG CTGATCCTGA CCCAGCTTCT CTTCAAGAAG
CCCGACCTCA CCATGATCCT CAACGGCGCA CTGGCCGGTC TGGTCTCCAT CACCGCAGGT
CCGCTTGACC CGACCCTCTT TGGAGCGCTC CTGATCGGTG CCGTGGGTGG CGTGATCGTT
GTCTTCACCG TGCCGATGCT CGACAAGATG AAGATCGACG ACGTTGTGGG TGCGATCCCG
GTTCACCTGC TGGCCGGTCT CTGGGGGACG TTTGCGGTTC CCTTCTACAC CGAAGGCACC
TCCTTCATCA CTCAGATCGT CGGCTTTGCC ACCATCGGTA TCTTCACCTT CGTGGTCTCC
GGTGTGGTCT GGATGATCCT GAAGGCCACC ATGGGCATCC GCGTCTCCGA GGAGGACGAG
ATCAACGGTC TCGACATGGC GGAGCTCGGC ATGGAAGCCT ACCCGGAGTT CAAAGGCAGC
TAA
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| Protein sequence | MKKLTVTLAA TALATLPGLA FAQEAAAETP DINPYIFTTL LFLIGGFLVF WMAAGFAMLE
AGLVRSKNVT MQLTKNVALF SIAAIMYWLV GFNLMYPGDG WIIPGVMGPL FATTSLEPVG
LGADAAALDY ASVGSDFFFQ LMFCATTASI VSGTLAERIK LWPFLIFVAI LTGVIYPIEA
SWVWGEGFLD GLGFSDFAGS TLVHAAGGFA ALAGALILGP RIGKYKDGRT IPMPGSNLAL
ATLGTFILWL GWFGFNGGSQ LAMGTVGDVT DVSRIFANTN MAAAAGAVTA LILTQLLFKK
PDLTMILNGA LAGLVSITAG PLDPTLFGAL LIGAVGGVIV VFTVPMLDKM KIDDVVGAIP
VHLLAGLWGT FAVPFYTEGT SFITQIVGFA TIGIFTFVVS GVVWMILKAT MGIRVSEEDE
INGLDMAELG MEAYPEFKGS
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