| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2587 |
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| Symbol | |
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| ID | 4077498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2724658 |
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| End bp | 2728113 |
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| Gene Length | 3456 bp |
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| Protein Length | 1151 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007911 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_614581 |
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| Protein GI | 99082427 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000427179 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCGCTTTT CCAAACTCAG GCTCAATGGC TTCAAAAGCT TTGTGGACCC TACCGACTTG
ATCATCGCAG ATGGTCTGAC GGGCGTTGTG GGGCCAAATG GCTGTGGCAA GTCGAACCTC
TTGGAAGCGC TGCGCTGGGT GATGGGGGAG ACCCGCGCCA AGGCGATGCG CGGCGGCGGC
ATGGAAGACG TGATCTTTGC CGGGACCGCC ACGCGACCTG CGCGCAACTT CGCCGAGGTG
AGCCTGCAGA TCGACAACTC CGAGCGGCTT GCGCCTTCGG GCTTTAACGA CTCCGATCAG
CTCGACATCG TGCGTCGGAT CACCCGCGAC GTGGGCTCTG CCTACAAGGC CAATGCAAAG
GACGTGCGGG CGCGGGATGT GCAGATGCTC TTTGCCGATG CTTCAACCGG GGCGCATTCA
CCTGCATTGG TGCGGCAGGG GCAGATTTCG GAACTGATCA ACGCCAAACC CAAGGCACGC
CGCCGGGTGC TGGAAGAGGC GGCGGGGATC TCTGGTCTCT ATCAACGCCG ACATGAGGCG
GAGCTGAAGC TCAAGAACAC CGAGCAAAAC CTCCTGCGGG TCGATGACGT GATCGAGCAG
TTGGCAACCC AGTTGGGCCA GTTGAGCCGA CAAGCAAAAC AGGCGCAGCG TTACCGTGAG
ATTGGCGAGA AACTGCGGCT GGCTGAGGGC ATGCTGCTCT ATCGCCGCTG GCGCGAAGCG
GATGAAGCCA GGCTTTTGGC CGAAGAGGAG CTGCGCACCC GCGTGACCCA GGCCGCCAAA
GCCGAAGGAT CGGCGCGTCT GGCTGCCGAG AAACGTGCCG AGGCCGAAGA AGGCCTGCCT
CCCCTGCGCG AGGAGGAGGC GATTGCCGCC GCGGTGTTGC AGCGCCTCAT GGTGCAACGC
GACGCGCTTT GGGATCAGGA CGCGCAGGCG CGGCAGAACA TCGAGCATCT CAACAACCGT
ATCCTGCAGC TCGGCAAGGA CATCGAACGC GAGTCAGGCC TGAACCGTGA TGCAGGCGAG
ACCATCGACC GTCTTGAGTG GGAAAAACGA GAATTGGCCA AGGCGGGCGA GGGGCATGAC
GACCGCATGG CCGAGGCGGC TGAAATTGCG CAAGAGTCGA CGTCGATCCT GCACAATGGC
GAAGAACATC TCTCGCAGGT GACAGAGGAT GTCGCCCGGC TTGCGGCGCG CCATCAGTCG
GCGCAACGCC TCGTCGAAGA TTGCCGCCGC GCCTTGGAGC GCGCACAAGG CGAAGGGGCG
AAATCGCGCA GCGCCCAAAG TGCGGCACAA GAAGCCCTCG CGGCCTCCGA AGCGGCATAT
GAGGCCGCCG TCGAGGCCGA GGAAGAGGCG CGCGAAGCCG CCGAAATGGC GGAAGAGGCG
CTTGCCGAGG CAGATGAACT GCGCACCGAG ACACAGGCAC ATGAGACCGA CGCGCGCGCC
AAGAGATCCG AGGCCGAGGG CGAGTTGGGC GCGCTGCGCG CCGAAGTCAC CGCGCTCGCA
AAATTGGTGG AGCGCGATAC CGCCGAGGGT GGTCAGGTCA TGGATGATCT GCGTGTGACG
CCCGGCTACG AGAAGGCGCT CGGCGCGGCG CTTGCGGATG ATCTGCGCGC CCCGCTCGCC
GATCAGGATG GCCCGACGGG CTGGCTGACA CTGCCGTCCT ATCAACGCGA TGCCCCACTG
CCCGATGGTG TCGAGCCGCT GGGCAAATAT GTCGACGGCC CGGATGCGCT CTGGCGGCGG
ATTGCACAGA TCGGCGTGGT GGACGCGGAT GAAGCCGCAC GCCTGCAACC GCTCTTGCAA
CCCGGCCAGC GTCTGGTGAC GCTTGAGGGC GACCTGTGGC GCTGGGATGG GTTTCGCTCC
TGGGCCGAGG ATGCGCCTTC TGCTGCGGCG ATGCGGCTCG AACAGATGAA CCGCCTGGAG
GCGCTGAAGC AGGACATGGC TCACGCCACC GCTCGCACGG AAGGGGCGCA GGCCGCGCAT
GAGGCCTTGG TGCGCAAGCT CGAAGAAGTG ACCCGCGCTG ATCAAGCCGC ACGGCAGGCC
CGTCGTGTGG CTGACCAGCG CGTTGCCGAC AGCGCCCGCG CCCTAAGCCG GGCGGAGGCG
GAGAGGAACC TCGCAGAAGG CAAGCTTGAG AATTTCGGTA TCGCGGTGGC GCGTCATGAA
GAAGATGCGC TGACGGCCTC GCTGCAATTG AAAGAGGCGG AAAACGCGCA GACGGCGCTT
GAGGATCTTG CCGAGGCCCG CGCCAAGGTC GAAGACATCA AGCACCGGGT TGAGGCCGCG
CGGATCACCA TGTTGACGCA TCGCTCGGCA CTCGACGAGC TGCGCCGCGA AGGCGAGGCC
CGCACCAAAC GCGCGCAGAC TGTCGCCAAG GAGCTCTCCG GCTGGCGCCT GCGACTGGAA
TCTGCGGGCA AGCGGATTGC GGAGCTCGAA GAGCGCCGCG AGACCAGCCA GGAGGAGCTC
GAGGATGCAA TGGCGGTGCC CGGCGAGATT GCTGAGACCC GTGAGGAGCT GAACGAGCAG
ATCTCAGATG CGGAGGCGCG CAAAGCCGAA GCCACCGATG CCCTTGTGGC GGCGGAGGCA
GTCCTGCGCG AAGCGGTGCA TCACGAACGC GAATCCGAGC GCCTTGCGTC AGAGGCCCGC
GAGGCTCGTG CCCGCTCCGA GGCCCGCAGC GAGGCCGCCC GCGAAACCGT GGACGCCACT
GCCGAACGCA TCGACGAAGT TATGCATCTG CAGCCTGCCG AGCTGTTGGA GCAGCTCCAG
GTGGCGCCCG AGGACATGCC CGACGCCGAG ACGCTGGAGG TCGAAGTCGC CCGCCACAAA
CGCCAGCGCG ATGCGCTGGG GGCGGTGAAC CTGCGCGCCG AAGAGGATGC GCGCGAGGTT
CAAAGCGAGC ATGACGCGCT GGTGACGGAA AAACAGGATC TCGAAGAGGC TGTAAAAACC
CTGCGTTCGG GTATTGCGTC GCTGAACCGG GAAGGACGTG AACGCCTGCT CACGGCGTTT
GAACAAGTGA ACAGCTCGTT TGCGATGCTG TTTACCCACC TCTTTGGCGG TGGTGAGGCG
AACCTCTTGA TGGTCGAGAG CGACGACCCA TTGGATGCGG GCCTTGAGAT CATGTGTCAG
CCGCCGGGCA AGAAGCTTTC GACGCTTTCG CTCTTGTCGG GGGGAGAGCA GACCCTGACG
GCGATGGCGC TGATCTTTGC GGTGTTCCTG TCCAACCCGG CGCCGATCTG TGTGCTCGAC
GAGGTGGATG CGCCCCTCGA TGACGCCAAT GTCACCCGTT TCTGCGACCT TCTGGACGAG
ATGTGCCGCC AGACAGACAC GCGGTTCCTG ATCATCACCC ACCATGCGGT GACGATGGCG
CGGATGGACC GGTTGTTTGG CGTGACCATG CAGGAAAAAG GCGTCAGCCA GCTGGTCTCT
GTTGATCTGA AGAAAGCCGA GGCAATGGTG GCCTGA
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| Protein sequence | MRFSKLRLNG FKSFVDPTDL IIADGLTGVV GPNGCGKSNL LEALRWVMGE TRAKAMRGGG
MEDVIFAGTA TRPARNFAEV SLQIDNSERL APSGFNDSDQ LDIVRRITRD VGSAYKANAK
DVRARDVQML FADASTGAHS PALVRQGQIS ELINAKPKAR RRVLEEAAGI SGLYQRRHEA
ELKLKNTEQN LLRVDDVIEQ LATQLGQLSR QAKQAQRYRE IGEKLRLAEG MLLYRRWREA
DEARLLAEEE LRTRVTQAAK AEGSARLAAE KRAEAEEGLP PLREEEAIAA AVLQRLMVQR
DALWDQDAQA RQNIEHLNNR ILQLGKDIER ESGLNRDAGE TIDRLEWEKR ELAKAGEGHD
DRMAEAAEIA QESTSILHNG EEHLSQVTED VARLAARHQS AQRLVEDCRR ALERAQGEGA
KSRSAQSAAQ EALAASEAAY EAAVEAEEEA REAAEMAEEA LAEADELRTE TQAHETDARA
KRSEAEGELG ALRAEVTALA KLVERDTAEG GQVMDDLRVT PGYEKALGAA LADDLRAPLA
DQDGPTGWLT LPSYQRDAPL PDGVEPLGKY VDGPDALWRR IAQIGVVDAD EAARLQPLLQ
PGQRLVTLEG DLWRWDGFRS WAEDAPSAAA MRLEQMNRLE ALKQDMAHAT ARTEGAQAAH
EALVRKLEEV TRADQAARQA RRVADQRVAD SARALSRAEA ERNLAEGKLE NFGIAVARHE
EDALTASLQL KEAENAQTAL EDLAEARAKV EDIKHRVEAA RITMLTHRSA LDELRREGEA
RTKRAQTVAK ELSGWRLRLE SAGKRIAELE ERRETSQEEL EDAMAVPGEI AETREELNEQ
ISDAEARKAE ATDALVAAEA VLREAVHHER ESERLASEAR EARARSEARS EAARETVDAT
AERIDEVMHL QPAELLEQLQ VAPEDMPDAE TLEVEVARHK RQRDALGAVN LRAEEDAREV
QSEHDALVTE KQDLEEAVKT LRSGIASLNR EGRERLLTAF EQVNSSFAML FTHLFGGGEA
NLLMVESDDP LDAGLEIMCQ PPGKKLSTLS LLSGGEQTLT AMALIFAVFL SNPAPICVLD
EVDAPLDDAN VTRFCDLLDE MCRQTDTRFL IITHHAVTMA RMDRLFGVTM QEKGVSQLVS
VDLKKAEAMV A
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