Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2573 |
Symbol | rnhA |
ID | 4076704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2713912 |
End bp | 2714385 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007897 |
Product | ribonuclease H |
Protein accession | YP_614567 |
Protein GI | 99082413 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0063199 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000590654 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGATT TGTTTGCCTA TACCGACGGA GCCTGCTCCG GTAATCCCGG CCCCGGTGGC TGGGGCGCCC TCTTGCGTGC CATGGACGGG GAGACCGTCC TGAAGGAGCG CGAACTCAAG GGCGGCGAAA AAGAGACGAC CAACAACCGG ATGGAGCTTC TGGCCGCGAT TCATGCGCTC GAGAGCCTTG CACGCCCCTC AAAGATCACC GTGGTGACGG ACTCCGCCTA TGTGAAGAAC GGCGTCACAG GCTGGATCTT TGGCTGGAAA AAGAACGGCT GGAAGACATC GGCGAAAAAG CCCGTCAAGA ACGTAGAGCT TTGGCAACGT CTGGACGCCG CACAATCTCG CCATGACGTC ACCTGGGAGT GGGTCAAGGG CCATGCGGGC CATCCGGAAA ACGAGCGCGC GGACGAGCTG GCACGCGCAG GAATGGCGCC GTTCAAATCC TCTGGAAAAT CTTCCAAAGG CTGA
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Protein sequence | MPDLFAYTDG ACSGNPGPGG WGALLRAMDG ETVLKERELK GGEKETTNNR MELLAAIHAL ESLARPSKIT VVTDSAYVKN GVTGWIFGWK KNGWKTSAKK PVKNVELWQR LDAAQSRHDV TWEWVKGHAG HPENERADEL ARAGMAPFKS SGKSSKG
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