| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2565 |
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| Symbol | |
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| ID | 4076696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2707049 |
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| End bp | 2709181 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007889 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_614559 |
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| Protein GI | 99082405 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00145552 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000902572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATCTG CTGATGACCT GATTTCCCTG GTCCGCGACT ACAACCCCAA AACGAATGAG
CAGCGCCTGC GCGACGCCTA CGCCTTTGGC GAGGAAATGC ATGACGGGCA GTTTCGCCAT
TCCGGGGAAC CCTATTTCAC ACACCCTGTC GCAGTCGCCG CAATCCTGAC CGAACAGCGG
CTCGATGATG CAACCATCAT CACGGCCCTG CTGCACGACA CGATCGAGGA CACCAAGGCC
TCTTACGAGG AAGTGTCGTT GCGTTTTGGC GAAGAAGTGG CGATGCTGGT CGATGGTGTC
ACGAAGCTGA CGAACCTGCA GCTCTCGTCG CGCGAAACCA AACAGGCGGA GAACTTTCGC
AAGCTGTTTA TGGCGATGTC GAAGGATCTT CGGGTCATTC TCGTCAAGCT GGCCGACCGA
CTGCACAACA TGCGCACCAT TCGTGCCATG CGCCCGGAAA AACAGGCGCA AAAAGCCCGC
GAAACCATGG ACATCTACGC CCCCCTCGCG GGGCGGATGG GGATGCAGTG GATGCGCGAG
GAACTGGAAG ACCTGGCCTT CAAGGTGCTG AACCCCGAAG GTCGCCAGTC GATTATCCGC
CGCTTTGTGA CCCTGCAGCG CGAGACCGGG GACGTGATCC ATCGGATTAC CGGCGACATG
AGGCTGGAGT TGGAGAAGGC GGGCGTTGAG GCCGAAGTCT TTGGCCGTGC AAAGAAACCC
TATTCGATCT GGCGCAAGAT GCAGGAAAAG GATCAGGGGT TCTCGCGTCT CTCGGACATT
TACGGCTTTC GCGTGATCAC GCGCTCCGAA GAGGACTGCT ATCGCACGCT TGGCACGATC
CACCAGCGCT GGCGGGCGGT GCCGGGGCGG TTCAAGGATT ATATCAGCCA GCCCAAATCC
AACGGCTATC GCTCGATCCA CACCACGGTG TCGGGACGCG ACGGCAAGCG GGTCGAGGTG
CAGATCCGCA CCCGGCAGAT GCATGATGTT GCGGAATCGG GTGTGGCGGC GCATTGGTCC
TATCGCGATG GTGTGCGCAC CGAGAACCCC TTTGCCGTTG ATCCCGCCAA GTGGATCGCC
TCGCTCACTG AACAGTTTGA TGGTGAAGAC GATCACGACG AATTCCTCGA AGCGGTGAAG
CTCGAGATGT ATTCGGATCA GGTGTTCTGC TTCACGCCCA AGGGCGACGT GATCAAGCTG
CCCAAGGGTG CCACACCGAT TGATTTTGCC TATGCGATCC ACACGCGTAT CGGCCACGCC
TGTGTCGGCG CCAAGGTAGA CGGCATCCGG GTGCCGCTCT GGACCCGGCT CAGAAATGGT
CAGTCGGTGG AAGTGATCAC CGCCGAAGGC CAGACTCCGC AGGTCAGCTG GCTGGAAATT
GCCACCACTG GCAAGGCGCG CACGGCTATT CGCCGGGCCC TACGGGAGGC GGACCGGGAA
CGGTTTGTAA AACTCGGCCA CGAGCTGGCG CGTTCCGCGT TTGAGCACAT GAACAAGAAG
GCCACCGACA AGGCGCTGGA AACTGCGGCC CGCGCGTTGC GGGTCAGTGA TGTGACCGAA
TTGCTGGCGC GCCTCGGGGC TGCGGTGATC ACCGCGCATG ACGTGGTGCA GGCCGTCTAC
CCCGAGCTTA CCGATAAGGA CGGCGAGGAA GTCTCGCCCC GGCGCGCCGT GATCGGCCTG
GAACCGGGCC AGAAGTTCGA ACGCGCTTCC TGCTGCGAGC CGCTGCCGGG AGAGCGCATC
ATCGGGATCA CTTCGCGTGG GCAGGGTGTC GTGGTACACT CGGCGGACTG TGACCGGCTC
GGAGAGTTCG AGGACCAGAT GGACCGGTGG GTCGATGTGC ATTGGCACTC GGGCACCCAT
CCCGCTGTCT ATGGCGTCAC ACTTGAATTG ACGATCGGGA ACGACGCAGG CGTTCTGGGG
CGCATCTGTA CGTTGATCGG CGAAAAGAAA GCCAACATTT CGAACCTTGA ATTCAAGGAT
CGGAAACCTG ACTTTTACCG CTTGATGATC AATGTGGAGC TGCGCGATGT GGAACAGCTG
CATTCGCTGA TACTGATGTT GGAAGCTGAA AGCGACGTCG CCGCGGTCGC GCGCTACCGG
GAAACGCCTG GAACGCAAGC CCGCACGATC TAG
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| Protein sequence | MTSADDLISL VRDYNPKTNE QRLRDAYAFG EEMHDGQFRH SGEPYFTHPV AVAAILTEQR
LDDATIITAL LHDTIEDTKA SYEEVSLRFG EEVAMLVDGV TKLTNLQLSS RETKQAENFR
KLFMAMSKDL RVILVKLADR LHNMRTIRAM RPEKQAQKAR ETMDIYAPLA GRMGMQWMRE
ELEDLAFKVL NPEGRQSIIR RFVTLQRETG DVIHRITGDM RLELEKAGVE AEVFGRAKKP
YSIWRKMQEK DQGFSRLSDI YGFRVITRSE EDCYRTLGTI HQRWRAVPGR FKDYISQPKS
NGYRSIHTTV SGRDGKRVEV QIRTRQMHDV AESGVAAHWS YRDGVRTENP FAVDPAKWIA
SLTEQFDGED DHDEFLEAVK LEMYSDQVFC FTPKGDVIKL PKGATPIDFA YAIHTRIGHA
CVGAKVDGIR VPLWTRLRNG QSVEVITAEG QTPQVSWLEI ATTGKARTAI RRALREADRE
RFVKLGHELA RSAFEHMNKK ATDKALETAA RALRVSDVTE LLARLGAAVI TAHDVVQAVY
PELTDKDGEE VSPRRAVIGL EPGQKFERAS CCEPLPGERI IGITSRGQGV VVHSADCDRL
GEFEDQMDRW VDVHWHSGTH PAVYGVTLEL TIGNDAGVLG RICTLIGEKK ANISNLEFKD
RKPDFYRLMI NVELRDVEQL HSLILMLEAE SDVAAVARYR ETPGTQARTI
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