Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2549 |
Symbol | |
ID | 4076680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2690971 |
End bp | 2692563 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007873 |
Product | ABC transporter related |
Protein accession | YP_614543 |
Protein GI | 99082389 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.165477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG CGCCAATTCT GCAGGTCAAG GACCTTCGGG TCGCCTTTCG TCAGGACGGT CAGCGGGTTG AGGCCGTCAA AGGGGTGTCC TTTGCCCTGT CTCGTGGCGA GACGGTGGCT TTGGTGGGCG AGTCGGGCTC CGGCAAATCG GTCTCGGCGC TTTCGACGGT GCAGCTCCTT GGTGATAGCG CCGAGGTCTC CGGCTCGGTG AACTATGACG GACAGGAAAT GATCGGCGCC GATGAACGTA CCCTGCGACG GGTGCGCGGC AATGACATCT CCTTCATTTT CCAGGAGCCG ATGACCTCTC TGAACCCGCT GCATACGATC GAAAAACAGT TGGGCGAGGC GCTTGCGCTA CATCAGGGAG TGATGGGAGA GGACGCCCGC GCGCGTGTGC TGGACCTGTT GAATAAGGTT GGTATCCGGG ACGCGGAAAC CCGACTGGGG GCTTATCCGC ACCAGCTTTC TGGCGGTCAA CGTCAGCGTG TAATGATCGC AATGGCGCTC GCCAACAAAC CCGACGTTCT GATCGCGGAC GAGCCCACAA CGGCGCTCGA TGTGACCATT CAGGCGCAGA TCCTCGATCT CCTTGCGGAT CTGAAACAGA GCGAGGGGAT GGGGCTTTTG TTCATCACCC ATGACCTCTC GATTGTGCGC CGTATTGCGG ATCGGGTCTG CGTGATGAAA TCCGGTGAAA TTGTCGAGGA AGGTCCAACG GCTGAGCTGT TTGCAAACCC ACAGCACCCC TACACCCAGA AACTCCTGGC GGCAGAACCC TCCGGTCGAC CCGCGCCGAT CCCGGAAGGG GCAACCGAAT TCGTCAGTGC CAAGGATCTC AAGGTCTGGT TTCCCATCCA GCGGGGGCTA CTGAAGCGCA TGGTTGGCCA TGTCAAGGCG GTCAATCCCA TGTCGCTCTC GGTGCGCGCC GGGGAAACTT TGGGAATTGT AGGCGAATCC GGCTCGGGCA AAACCACGAT GGCACTTGCG ATCATGCGCC TTATCGCCTC CGAAGGCGAG GTGCGCTTTC AGGATCAGGA CCTGCGCCAA TGGTCCACGC GGGACCTGCG CCGGTTGCGC AAGGACATGC AGATCGTGTT TCAGGATCCG TTTGGCTCGC TGTCTCCGCG TATGACATGC CAGCAGATCA TTGCCGAAGG TCTGGCAATT CATGAGGTTG ACCAACATCG TAAGCCGCGT GATCTTGTGG CTGATGTAAT GCAGGAAGTG GGTCTCGACC CTGCCACCAT GGACCGCTAT CCACATGAAT TCTCAGGTGG GCAGCGTCAG CGCATTGCCA TCGCCCGTGC AATGGTTCTG CGCCCCAAGC TGGTGGTTCT GGACGAGCCG ACCTCGGCCC TTGATATGAC GGTCCAGGTG CAGATCGTGA ACCTGCTGCG CGATCTTCAG GCCCGCTACG GGCTTGCCTA TCTCTTCATC AGCCATGACC TCAATGTGGT GCGCGCCATG TCGCATGACA TCCTGGTGAT GAAAGCCGGA GACGTGATCG AGCAAGGCCC CGCCGAGGAG GTATTTGCCA ATCCCAAAGA AGAATACACA CGGCATCTGC TCTCTGCCGT GACGGGTGCC TAG
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Protein sequence | MTQAPILQVK DLRVAFRQDG QRVEAVKGVS FALSRGETVA LVGESGSGKS VSALSTVQLL GDSAEVSGSV NYDGQEMIGA DERTLRRVRG NDISFIFQEP MTSLNPLHTI EKQLGEALAL HQGVMGEDAR ARVLDLLNKV GIRDAETRLG AYPHQLSGGQ RQRVMIAMAL ANKPDVLIAD EPTTALDVTI QAQILDLLAD LKQSEGMGLL FITHDLSIVR RIADRVCVMK SGEIVEEGPT AELFANPQHP YTQKLLAAEP SGRPAPIPEG ATEFVSAKDL KVWFPIQRGL LKRMVGHVKA VNPMSLSVRA GETLGIVGES GSGKTTMALA IMRLIASEGE VRFQDQDLRQ WSTRDLRRLR KDMQIVFQDP FGSLSPRMTC QQIIAEGLAI HEVDQHRKPR DLVADVMQEV GLDPATMDRY PHEFSGGQRQ RIAIARAMVL RPKLVVLDEP TSALDMTVQV QIVNLLRDLQ ARYGLAYLFI SHDLNVVRAM SHDILVMKAG DVIEQGPAEE VFANPKEEYT RHLLSAVTGA
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