Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2542 |
Symbol | |
ID | 4076673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2684043 |
End bp | 2684927 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007866 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_614536 |
Protein GI | 99082382 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.854548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAA CGGGCAATAA AAAGACAGTA AAGATCCACG AGGGCGATCC AAACACCACC GGCCACGAGT GGGACGGGAT CATGGAATTC GACAACCCGA TGCCGCGCTG GTGGCTGTGG GTGTTCTACG CCACGATCAT CTGGGGCATC GGATATACCA TCGCCTATCC TGCATGGCCG ATGGTCAGCG CGGCCACCTC CGGGATCACC GGATGGTCTT CGCGTGGTCA GGTCGAGGCC GAGATTGCCG CCGTCGATGA GGCCAACGCG CCCATCAACG CCCAGCTCGA AGCGCTGGAA CTTGCCGCCA TTCCGGGCCA TCCCGAGCTT GAGGGCTACG CCGTCTCTGC CGGGGCCGCC GTCTTCAAGA CATGGTGTGC GCAGTGTCAC GGGTCTGGTG CGGCGGGGGC CAAAGGCTAT CCGAACCTCT TGGATGATGA CTGGCTCTGG GGTGGCACGA TGGAAGACAT TCATGCCACG GTCTCTTATG GCATTCGCAA CGAGGAAAGC GACGATGCCC GCTATTCCGC AATGCCCGCC TTTGGTCGTG ATGAACTGCT CCAAAAAGAA GAGGTCAGTC AGGTCGTAAA CTACGTGATG TCCCTGTCAG ACACGCCCAA AGACGCAAGC GAAGTGGCTG CGGGCGCGGT TGTGTTCGAA GAAAACTGCG CCTCCTGTCA TGGGGCGGAC GCATCGGGTG ATATCTACCA AGGTGCGCCG AACCTGAAGG ACGCGATCTG GCTCTATGGG GGCGACTACG ACACTCTCTA CGAGACAGTC TGGAACTCGC GTTTTGGGGT CATGCCGAAC TGGGACAGCC GTCTGAGCGA AGCTGAGATC CGCGCAGTCA GCGCCTATGT CCACCAATTG GGTGGCGGCG AGTAA
|
Protein sequence | MSETGNKKTV KIHEGDPNTT GHEWDGIMEF DNPMPRWWLW VFYATIIWGI GYTIAYPAWP MVSAATSGIT GWSSRGQVEA EIAAVDEANA PINAQLEALE LAAIPGHPEL EGYAVSAGAA VFKTWCAQCH GSGAAGAKGY PNLLDDDWLW GGTMEDIHAT VSYGIRNEES DDARYSAMPA FGRDELLQKE EVSQVVNYVM SLSDTPKDAS EVAAGAVVFE ENCASCHGAD ASGDIYQGAP NLKDAIWLYG GDYDTLYETV WNSRFGVMPN WDSRLSEAEI RAVSAYVHQL GGGE
|
| |