Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2537 |
Symbol | |
ID | 4076539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2677985 |
End bp | 2678143 |
Gene Length | 159 bp |
Protein Length | 52 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638007861 |
Product | cytochrome oxidase maturation protein, cbb3-type |
Protein accession | YP_614531 |
Protein GI | 99082377 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.544754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTT TGTCTTATCT GATCCCAATT TCCCTTATCC TCGGCGGGGC AGGGTTGATT GGGTTCATCT ATACGGTGCG CTCGGAGCAA TATGACGACC CGGAAGGGGA TGCGCGCCGT ATCCTGAGTG ACGAGTGGGA TGATCACCCC AAACCTTGA
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Protein sequence | MTVLSYLIPI SLILGGAGLI GFIYTVRSEQ YDDPEGDARR ILSDEWDDHP KP
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