| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2536 |
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| Symbol | |
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| ID | 4076538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2676295 |
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| End bp | 2677785 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007860 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_614530 |
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| Protein GI | 99082376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGG ATGCGCGTAC CGGCGAAGTG CTGCATTCGC GCAATGCGGA TACTCGGCTG
CACCCCGCCT CGCTGACCAA GATGATGACC CTATACATCG CCTTTGAGGC GGTGCGGAAC
GGGGAAATCA CCCTCGACAC CCAGATCACG GTTTCGCGCA ATGCCGAGGC AGAACCTCCT
TCTGAGTTGG GCCTGCGCCG CGGGCAAAAA ATCGCACTAC GGTATCTGAT CCGGGCCGCA
GCGGTAAAAT CCGCCAATGA TGCGGCCACG GCCATTGGTG AGGCGATCTC CGGGTCTGAG
GCGGCCTTTG CGCGGCGAAT GAATCGCACC GCCAAGGCAC TGGGAATGAC CCGCACGACC
TTCAAGAACG CGCATGGGCT GACTGCCAAT GGTCACATGT CGACGGCACG CGACATGACA
ATCCTCGGAC GTCATATGCT TTATGACTAC CCTGAGTATT ATAATCTCTT TTCGCGCACC
TCGACCAACG CGGGCACCAA GGTTGTCTAC AACACCAACC GCCGCTTTCT CGCGGCCTAC
CGCGGTGCGG ATGGCATCAA GACCGGCTAT ACGCGCGCAG CCGGGTTCAA CCTCGTCTCC
TCTGCAAAAC GGGGCGATGA GCGCATCATT GCAACCGTAT TTGGCGGGAA ATCCACCGCG
GCACGCAACG CCAAGATCGC AGAACTCCTG GACCTCGGCT TCCGGCGCGC TCCGGCCTAT
GCCAAACTGC AAAAGCCCCC TATGCCGCCC TACCTCGGCA ACAGCGGTGT GCGCCTGGCA
GAGGATGACA CGCATGGCAT GGCCGGAAAG ACGATCCGCG TCAGCGGGGT GATTTCAGAG
ACCCTGCGCC CACGGCCCCG TCCGCTGCCA GAGCCTGCCC CGGAAACGCT ACTTGCAGAG
GCTGAAACAG AGGTCGAGAC CGGTACTGTT GCCGCACCTG AAGAGGTGCA GCTCGCCGCG
CTGGATAGCG ATGCCCTGAA ATCCGGCATC AACGACGCTC TTTTGGAAGT CACCGAAGTC
TCCGATGTCT CGGCAATCCA ACCTCAGGCG CGGCCCGAGG CTCTTCAGGC AGAGGTGGAA
GGTGAGCAAG CCCTGCAGGC GGAAATCCGA ACAGCGGTCG CGCGCGCCGT TGAGGCCCCG
ACGCAACCGC GCTACACCGG GCCACGTCCA CAGGCGCGCC CAGCAAAATT CAACACCGAA
GTTGCTTCGC TCGAGGAACC AGTCGTGGTG ACACGCCTGT CGACCTCTGG CGGCCGCTAC
TGGGGGATCA ATGTCGGACG CTACACCAAC CGTTTTCAGG CCGAAAAAGT CTTGTTGCGC
ACGGCTTTGG CCGAAATGGA GACGCTCGAA GGCTCTCTGC GCAAGGTGGT GCAGAGTCCG
CGCGGATTTG ACGCCAATTT CCTTGGGATG ACCAAGGAAA GCGCCGAGCT CGCATGCAAG
CGCCTCAACT CTCGCAATGT CACCTGCGAG ACACTTGGCC CCTCCTCCTA A
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| Protein sequence | MVMDARTGEV LHSRNADTRL HPASLTKMMT LYIAFEAVRN GEITLDTQIT VSRNAEAEPP
SELGLRRGQK IALRYLIRAA AVKSANDAAT AIGEAISGSE AAFARRMNRT AKALGMTRTT
FKNAHGLTAN GHMSTARDMT ILGRHMLYDY PEYYNLFSRT STNAGTKVVY NTNRRFLAAY
RGADGIKTGY TRAAGFNLVS SAKRGDERII ATVFGGKSTA ARNAKIAELL DLGFRRAPAY
AKLQKPPMPP YLGNSGVRLA EDDTHGMAGK TIRVSGVISE TLRPRPRPLP EPAPETLLAE
AETEVETGTV AAPEEVQLAA LDSDALKSGI NDALLEVTEV SDVSAIQPQA RPEALQAEVE
GEQALQAEIR TAVARAVEAP TQPRYTGPRP QARPAKFNTE VASLEEPVVV TRLSTSGGRY
WGINVGRYTN RFQAEKVLLR TALAEMETLE GSLRKVVQSP RGFDANFLGM TKESAELACK
RLNSRNVTCE TLGPSS
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