Gene TM1040_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2523 
Symbol 
ID4076525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2663516 
End bp2664313 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID638007847 
Productpeptidase S49 
Protein accessionYP_614517 
Protein GI99082363 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.829531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC GATTGCCCTT CACAAAACGC CCGCCCCAAG TGGCGGTGGT GCGCCTGTCC 
GGAGCCATTG GCATGGCTGG GCGCGGAAGC CTGAACGACT CCACGCTCGC TCCGGTCTTG
GAACGCGCTT TTACGAAGGG CAAGCCGAAG GCCGTCGCCC TTGAGATCAA TTCCCCCGGC
GGCAGCCCGG TGCAGAGCGC GCTGATCGGG GCGCGTATTC GCCGCTTGGC TGAGGAACGC
GACGTTCCTG TGATCGCTTT CGTCGAGGAC GTGGCGGCCT CGGGCGGCTA TTGGCTCGCT
GCGGCTGCGG ACGAGATCTA TGCGGATGCG AGCTCGGTTG TTGGGTCGAT CGGCGTGATT
TCCGCGGGCT TTGGCGCGCA TGTGTTCTTG GCGCGACAGG GGCTGGAGCG CCGCGTGCAC
ACTGCTGGCG AGAGCAAAAG CATGCTCGAT CCTTTCCGCC CGGAAAACGA AGAGGATGTG
GCGCGCCTGA AGGGGCTGTT GAACGATATC CACGCTAATT TCATCGATCA TGTGACCGAC
CGTCGGGGAG AGAAGCTCTC CACCGAGGAA AAGCTCTTTA CCGGAGAGAT CTGGCTGGCG
CGGCGCGCCA AGGAGCTCGG TTTGATCGAC GGCATCGGCC ATCTGAGGCC AGTTCTGCAA
GAGCGGTTTG GGGACAAGGT GCGCCTGCGC CGCCACGGTA TCAAAAAGCC CTTCCTGAGC
CGGTTTGGCC TGTCCATGGC CGAAGATGCG TTGGCAGCGG TTGAGGAGCG CGCCCAGTTT
GCGCGTTTTG GCCTTTGA
 
Protein sequence
MSFRLPFTKR PPQVAVVRLS GAIGMAGRGS LNDSTLAPVL ERAFTKGKPK AVALEINSPG 
GSPVQSALIG ARIRRLAEER DVPVIAFVED VAASGGYWLA AAADEIYADA SSVVGSIGVI
SAGFGAHVFL ARQGLERRVH TAGESKSMLD PFRPENEEDV ARLKGLLNDI HANFIDHVTD
RRGEKLSTEE KLFTGEIWLA RRAKELGLID GIGHLRPVLQ ERFGDKVRLR RHGIKKPFLS
RFGLSMAEDA LAAVEERAQF ARFGL