Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2458 |
Symbol | |
ID | 4076940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2599378 |
End bp | 2601405 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007782 |
Product | 2,4-dienoyl-CoA reductase |
Protein accession | YP_614452 |
Protein GI | 99082298 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.425338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGT ACCCACATCT GCTGGCCCCG TTGGATCTGG GCTTTACCAC GCTGAAGAAC CGGGTTCTGA TGGGCTCCAT GCACACCGGG CTCGAAGAGA CCCGCGACTG GAATCGCGTG GCCGAGTTCT ATGCTGCGCG CGCGCGTGGC GGGGTGGCCT TGATGGTCAC CGGCGGCATT GGCCCCAACC TCGAAGGCTC CGTGCTGCCG GGTGCGGCGA TGATGACCAC AGAAAAAGAT GTCGAGAACC ATTCGGTCGT CACGAAGGCC GTACATGAGG CAGACGGCAA GATCGCAATG CAAATCCTGC ACGCAGGCCG CTATGCCTAT GGTCCCAAAT GCGTTGCACC GTCGCCCGTC AAGTCGCCCA TCTCGCCCTT CCCCCCGACC GAGCTCGACG AGGAAGGTAT CGAAAAACAG ATCTCCGACA TCGTGAACGC CGCGCGGCTG GCGCAAGAAG CAGGCTATGA TGGTGTCGAG ATCATGGGGT CGGAGGGGTA CTTCCTCAAT CAGTTCCTCG TCACACATAC CAACAAACGC GAAGACCGCT GGGGCGGATC CTATGAGAAC CGCATGCGTC TGCCGGTCGA GGTGGTGCGC CGTGTACGCG AGGCCGTGGG GCCGGAGTTC ATCCTGATTT ATCGTCTCTC GATGATCGAT CTTGTGCCTA ATGGCTCCAC CTTCGAGGAG GTCGTGCAAC TGGCCAAGGC GGTCGAGACC GCCGGGGCGA CGATCATCAA CACCGGCATT GGCTGGCACG AAGCGCGCAT ACCGACGATT GCCACATCGG TGCCGCGCGC GGCCTTTGCC TGGGTGACGC AGAAACTGAT GGGGCAGGTC TCGATTCCGG TGATCACTTC GAACCGGATC AATACGCCCG AGGTTGCAGA GGACGTCCTC GCGCAGGGCT GTGCCGATAT GGTCTCCATG GCGCGGCCAA TGCTGGCGGA TGCGGATTTT GTGGCCAAAG CCGCCGCCGG ACGCGGAGAT GAAATCGCGC CCTGTATCGC CTGCAACCAG GCCTGTCTGG ATCACACGTT TGGTGGCAAG CTCACGTCCT GCTTGGTGAA CCCCCGCGCC TGCCACGAAA CCGAGCTCAC TCTCACCCCT GCTGAGACGA TCAAATCCGT CGGGATCGTC GGTGCTGGAC CTGCGGGTCT GTCGACCGCG CTTGCCGCGG CAGAGCGCGG CCACAAGGTC ACGTTGTTTG ATGCCGCAGA TGAAATCGGC GGGCAGCTCA ATATGGCCAA ACAGGTCCCC GGCAAAGAGG AGTTCTGGGG GCTTGTTGAT TGGTATCGCA CTATGATTGC AAAGGCAGGC GTCACTCTGG AATTGGGCCG CCGCGTCGAT GCCGCAGATC TCAAGGACTT CGACGAGGTG ATCATCGCGA CCGGAGTCAC GCCGCGTGAT CCACACATTC CGGGTCAGGA CCACCCTTCG GTCCTGAGCT ACATCGACGT CCTGCGCCAC AAAGCTCCGG TTGGAGAAAA GGTTGCGGTC ATCGGGGCGG GCGGCATCGG GTTTGATGTG TCGGAATACC TGCTGCACGA GGGCGAAAGC CCCGCTGAAA GCCTACCACT TTGGATGCGC GAATGGGGGG TGACCGACCC GGCCGATCAT CGATCGGGCC TCGCTCCCGA GGGCCCTCAG CCCGAGGCTC CGGCACGCAA GGTCACCTTG CTGCAGCGCA AGGCAGAGCG CCACGGCAAA CGTCTGGGAA AAACAACCGG CTGGATTCAT CGCGCAACGC TCAAGATGAA AGACGTCGAA TTTGTCGGTG GCGTCAACTA CGAGCGCATC GACGATGATG GCCTGCATGT GAGCTTTGGC GAAGCGCGCG AAAACCCAAC CGTGATCAAG GCAGACAACA TCGTGCTGTG TGCCGGACAG GTCAGTGAAC GCTCTCTTGC GGACAAGCTC GCCGAAATGG GAATCACCGC CCATGTCATT GGCGGCGCGG ATGTTGCGGC AGAACTCGAC GCCAAACGGG CCATAAATCA GGGCACCCGC CTCGCGGCCA CGCTCTGA
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Protein sequence | MAAYPHLLAP LDLGFTTLKN RVLMGSMHTG LEETRDWNRV AEFYAARARG GVALMVTGGI GPNLEGSVLP GAAMMTTEKD VENHSVVTKA VHEADGKIAM QILHAGRYAY GPKCVAPSPV KSPISPFPPT ELDEEGIEKQ ISDIVNAARL AQEAGYDGVE IMGSEGYFLN QFLVTHTNKR EDRWGGSYEN RMRLPVEVVR RVREAVGPEF ILIYRLSMID LVPNGSTFEE VVQLAKAVET AGATIINTGI GWHEARIPTI ATSVPRAAFA WVTQKLMGQV SIPVITSNRI NTPEVAEDVL AQGCADMVSM ARPMLADADF VAKAAAGRGD EIAPCIACNQ ACLDHTFGGK LTSCLVNPRA CHETELTLTP AETIKSVGIV GAGPAGLSTA LAAAERGHKV TLFDAADEIG GQLNMAKQVP GKEEFWGLVD WYRTMIAKAG VTLELGRRVD AADLKDFDEV IIATGVTPRD PHIPGQDHPS VLSYIDVLRH KAPVGEKVAV IGAGGIGFDV SEYLLHEGES PAESLPLWMR EWGVTDPADH RSGLAPEGPQ PEAPARKVTL LQRKAERHGK RLGKTTGWIH RATLKMKDVE FVGGVNYERI DDDGLHVSFG EARENPTVIK ADNIVLCAGQ VSERSLADKL AEMGITAHVI GGADVAAELD AKRAINQGTR LAATL
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