Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2414 |
Symbol | |
ID | 4076740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2554164 |
End bp | 2554964 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007736 |
Product | hypothetical protein |
Protein accession | YP_614408 |
Protein GI | 99082254 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083 [TIGR03084] conserved hypothetical protein TIGR03084 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.096621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAG CCAGCGATTT TCTTGAGGAA AGCCAGATCT TGGCGCGTTG CCTTGAGGCC GCGCCGGATC GCATCTTTGC CACGAAAACG CAGTTCAAAT CCTGGACCGT CGACGACATC CTTGGTCATC TTCATTTCTT CAATGCCGCC GCCGAAGCTG CCCTGGCCGG AGCGGACGCG TTTGACGCGA TGATGGCTCC TGCCATGGAG AGGTTCTCCT CGGGGGGCAA GATCCTCGAT TTGCAGTTTC CTTGGCTTGG GGATCTGCAA GGGCGCGCCC TGTTCGACGC CTGGCAACAG GGCGCCGCGC GCGTCGCAGA GGCCTATGAA GCGGCTGATC CCAAAGCGCG GGTCAAATGG CTTGGCCCAG AAATGAGCGC CCTGAGCTCC ATCACGGCAC GACAGATGGA AACCTGGTCA CATGGACAGG CAATTTTTGA TCTCCTTGGC GAGACCCGTC ACGAGAGCGA TCGCATCCGC AATATCGCGC ATCTTGGGGT CGCTACGTTC GGGTGGAGTT TTCGGGTCTG GGGACAGGAC GTCCCAGAGC CTGCGCCCTA TGTGGAGCTG ACCGCCCCTT CTGGTGCGAT CTGGAGCTGG AATGCGCCGC AGGAAGCCAA TCGCGTCACC GGGTCCGCGG TCGAGTTTGC TCAAATCGTC GCGCAGACGC GCAACTGGAA GGACACTGCC GTTAAAGCAA ACTCGGAGGT GGCGCAGCGT TGGATGCAGC AGGCGCAGTG TTTTGCTGGG CCACCAAACT CTCCCCCTGC ACCGGGCACG CGTTTCTGCG CCCCAAGCTG A
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Protein sequence | MQQASDFLEE SQILARCLEA APDRIFATKT QFKSWTVDDI LGHLHFFNAA AEAALAGADA FDAMMAPAME RFSSGGKILD LQFPWLGDLQ GRALFDAWQQ GAARVAEAYE AADPKARVKW LGPEMSALSS ITARQMETWS HGQAIFDLLG ETRHESDRIR NIAHLGVATF GWSFRVWGQD VPEPAPYVEL TAPSGAIWSW NAPQEANRVT GSAVEFAQIV AQTRNWKDTA VKANSEVAQR WMQQAQCFAG PPNSPPAPGT RFCAPS
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