| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2342 |
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| Symbol | |
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| ID | 4078332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2463866 |
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| End bp | 2464684 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007664 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_614336 |
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| Protein GI | 99082182 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA AACGGGGACT CGCGATATGC TGTGGCCTGG TGTTTGCAGC ACTTGCGCAG
GCGCAAGAGG CGCCCGCGCC GTTTGCCGAC TTTGAGGCCA AACGTGTGCG CCCGCCCGCA
CCAGGCACCC AAAAGCGCAT CACGGTTCAG ATAGAACCCA AAGCCCCTAA GGTTGGTGAA
GAGAGTGCAA GCCCTCAGGG TGAGAGCGAT GTGGGCTCTG TCCCAACCGC ACCTCAGGCG
CGGTATGCGT GGTTCTGGGA TGAGGTCGGG GCGGATCTCG CTGGGGCGTC TCCCGGACGG
TTGCAGAGTA GTCTCGCGGT GCTTGAGGCG CGCAATGACA TTGCCACGCC GCGACTGCAG
GAGTTGCAGA GCATGATCTC CAACTATGGG GTGTCGCTGT TGACCTCGAC AATCGGCACC
GAAGTGTCCC CGGCCTTGGT GCTTGCGGTG ATGGCGGTCG AATCCGGTGG CAAGCCTGAT
GCGGTGAGTC GCGTGGGGGC AGAGGGGCTG ATGCAGCTCA TGCCGGATAC GGCGACCCAG
TTCGGCGTTG ATGATTCCTT TGACCCAAAA CAGAACATCG CAGGCGGCGT TCGGTTCCTG
GATCAGTTGA TGCGGGATTT TTCGGGAGAT CCGGTTCTGG TCCTGGCGGG CTACAATGCC
GGGGCAGGGG CGGTGCGTGA GCATGGCGGG GTGCCACCCT ATGCAGAGAC GCGGGATTAT
GTCCCAAAGG TTCTTGCGGC GTACCGGCTG GCGCGAAATC TCTGCACGAC GCCTCCGATC
ATGATTTCCG ATGGCTGCGT GTTTCAAACG ATGAAATGA
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| Protein sequence | MSVKRGLAIC CGLVFAALAQ AQEAPAPFAD FEAKRVRPPA PGTQKRITVQ IEPKAPKVGE
ESASPQGESD VGSVPTAPQA RYAWFWDEVG ADLAGASPGR LQSSLAVLEA RNDIATPRLQ
ELQSMISNYG VSLLTSTIGT EVSPALVLAV MAVESGGKPD AVSRVGAEGL MQLMPDTATQ
FGVDDSFDPK QNIAGGVRFL DQLMRDFSGD PVLVLAGYNA GAGAVREHGG VPPYAETRDY
VPKVLAAYRL ARNLCTTPPI MISDGCVFQT MK
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