Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2296 |
Symbol | |
ID | 4078480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2415802 |
End bp | 2416452 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638007618 |
Product | GntR family transcriptional regulator |
Protein accession | YP_614290 |
Protein GI | 99082136 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CGAAGAGCAG CACCCAGAAA GACGCCTATG GGCTGATCCT CGATGCCATC GACGTGGGCA TGTTCAAACC CGGCGACCGC TTGGTCGAGA ATGATCTGGC GGATCGTTTT GGGGTGTCGC GCACGCCCAT TCGCGAGGCA TTGCAGCGGC TGGAAACCCA GAGCCTTCTG GAGCGTGATG GCCGGTCACT GATCGTGGCC TCGCTTGATC ACAACCAGAT GGCAGAGCTT TATGTGGTGC GCCGCGAGCT GGAGGGGCTG GCGGCGGCGC TGGCGGCCCG CCATGCCACC GACGAAGAGG TGCAGGTTCT GCGCGACATG GTCGAGGCCG ACGATGCGCT GATCGACAAC CCGGTCGAAC TTGCCAAGGC GAACCGGCGG TTTCACCAGC AGATCCATCT GGCCTCCCAC AACCGCTATC TGGTGCAGCA ACTGGATCTG GTGCATCGCT CCATGGCGCT GATGGCCACG ACATCGCTGG CTGCCGAGGG GCGCGGGCGC ATCGCGCAAG ACGAGCATAA GGCGATTGTC GCGGCGATTG CCAACCGGGA TGAGGCGGCG GCAGGGCAGG CGCTGAAGGA TCATATCTCG GTGGCCTTCA CCACGCGATT GAAACAGGAC GCGGGCGCAC GCGGCGGCTG A
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Protein sequence | MSQTKSSTQK DAYGLILDAI DVGMFKPGDR LVENDLADRF GVSRTPIREA LQRLETQSLL ERDGRSLIVA SLDHNQMAEL YVVRRELEGL AAALAARHAT DEEVQVLRDM VEADDALIDN PVELAKANRR FHQQIHLASH NRYLVQQLDL VHRSMALMAT TSLAAEGRGR IAQDEHKAIV AAIANRDEAA AGQALKDHIS VAFTTRLKQD AGARGG
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