Gene TM1040_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2264 
Symbol 
ID4077331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2380533 
End bp2381048 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content63% 
IMG OID638007586 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_614258 
Protein GI99082104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.159731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAG ATACCCCACC CTCCGAAAAA CCGACCTCTC CAATCCGCCC CACCGATGAT 
GAGGCGCGCA CGCTGGCCCA GAGCCTGATC GCAGAGGCAG ATTTTGCCGC GCTCGCAACG
CTCAGTGATG AGGGCCACCC GGTCCAGAGC CGCGTCGCCT TTGCGCTCGA TGCGTCGGGT
GGGCCGATTT CGCTCGTCTC GACACTGGCG CAGCACGCTC AGGCGATGGC GGTCCGCCCG
CAGGTCTCTC TCCTTGTGGG AGAGCCGGGC GAGAAGGGCG ATCCGCTGAC CCATCCGCGC
CTGACACTCA ATGGGACGGC CGAGATCCTG CCCAATGGTT GCCCCGCGCA TGAGGAGATG
GCCACGCATT ATCTGCGCCG CCACCCCAAG GCAAAGCTCT ACATTGGATT TGCCGATTTT
CATTTTGTGC GTTTCCAGAT CCGGGAGGCG TTTTTGAACG GCGGCTTTGG CAAGGCCTAT
CAACTCACGC CGGCGGATCT GGGCCTCGTG CCCTAG
 
Protein sequence
MPQDTPPSEK PTSPIRPTDD EARTLAQSLI AEADFAALAT LSDEGHPVQS RVAFALDASG 
GPISLVSTLA QHAQAMAVRP QVSLLVGEPG EKGDPLTHPR LTLNGTAEIL PNGCPAHEEM
ATHYLRRHPK AKLYIGFADF HFVRFQIREA FLNGGFGKAY QLTPADLGLV P