| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2255 |
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| Symbol | |
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| ID | 4077322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2370043 |
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| End bp | 2371710 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007577 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_614249 |
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| Protein GI | 99082095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCT ACCAATACGT CTACCACATG CAGGGTGTCT CCAAGACCTA CCCGGGTGGC
AAGAAATGTT TTGAAAACAT CCACCTGTCC TTCCTGCCCG GCGTGAAGAT CGGTGTTGTC
GGCGTCAACG GCGCCGGTAA ATCGACCCTG ATGAAGATCA TGGCCGGTCT CGACAAGGAT
TTCACCGGCG AGGCCTGGGC GGCCGAGGGC GCCAAGGTCG GCTATCTGCC GCAGGAACCG
CAGCTCGACG AGAGCTTGAG CGTGCGCGAA AACGTCATGC TTGGCGTCAA GGAAAAGAAA
GACAAGGTCG ATCGCTTCAA CCAGATCGCG GTTGAGATGG CTGAAAACTA CACCGACGAG
CTGATGGAAG AGATGACGGC CCTGCAGGAC GCCATCGATT CCGAGAACCT CTGGGATCTC
GACAGCCAGG TCGATGTCTC CATGGAGGCG CTGCGCTGCC CGCCGGATGA TGCCAAGATC
GCTGATCTTT CGGGCGGTGA GAAGCGCCGT GTGGCGCTGT GCAAGCTTCT CTTGGAAGCG
CCCGACATGC TGCTTTTGGA CGAACCGACC AACCACCTGG ACGCGGAAAC CATCGCCTGG
CTGCAGCAGC ACCTCATCGA CTACAAGGGC ACCATCCTCT GCGTCACCCA CGACCGCTAT
TTCCTCGACG ACATCACCGG CTGGATCCTG GAACTCGACC GCGGGCGCGG CATTCCTTAC
GAGGGCAACT ATTCGAGCTG GCTGGAGCAA AAGGCCAAAC GTCTGGAGCA GGAAGCCCGC
GAGGACAAGG CAAAGCAGAA AACGCTGGAG CGCGAACTCG AATGGATGCG TCAGGGCCAG
AAAGCCCGTC AGGCAAAATC CAAGGCCCGT ATCGCCGCCT ACAACGAGAT GGCCAACACC
TCCGAGCGGG AAAAGGTCGG GCGCGCCCAG ATCGTCATCC CCAACGGTCC GCGTCTCGGC
GGCAAGGTGA TCGAGGTCGA AAACCTCGGC AAACACTACG GCGACAAGCA GCTGATCGAA
GACCTGTCCT TCTCGCTGCC GCCGGGTGGC ATTGTTGGTG TGATCGGTCC CAACGGCGCG
GGTAAGTCGA CGCTGTTCAA GATGCTCACT GGTCAGGAAC AGCCCGATCA GGGGTCTGTG
ACCTATGGCG ACACGGTAAA GCTCTCTTAC GTTGACCAGT CCCGCGATGA CCTCAACGAC
AACGACACCG TCTGGGAAGC GATTTCCGGT GGTGCCGAGA TTATTGAGCT GGGCGATGCG
CAGGTCAATT CGCGCGCCTA TTGTTCCTCG TTCAACTTCA AGGGCGGCGA TCAGCAGAAG
AAGCTGAACC TTCTCTCTGG GGGTGAGCGC AACCGTGTCC ACATGGCGCG CCTTCTGAAA
GAAGGCGGCA ACGTCTTGCT GCTCGACGAG CCGACCAACG ACCTCGACGT GGAAACCCTG
CGTGCGCTTG AAGATGCGCT GGTCGATTTT GCCGGCTGCG CGGTGGTGAT CTCGCACGAC
CGTTTCTTCC TCGACCGGAT CTGTACCCAC ATCCTCGCCT TTGAAGGCGA CGCGCATGTG
GAGTGGTTCG AGGGCAACTT CGAAGACTAT GAAGAAGACA AGAAACGCCG TCTGGGTCCG
GACGCACTTG AGCCCAAGCG CCTGAAGCAC AAGAAGTTTG TGCGGTGA
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| Protein sequence | MASYQYVYHM QGVSKTYPGG KKCFENIHLS FLPGVKIGVV GVNGAGKSTL MKIMAGLDKD
FTGEAWAAEG AKVGYLPQEP QLDESLSVRE NVMLGVKEKK DKVDRFNQIA VEMAENYTDE
LMEEMTALQD AIDSENLWDL DSQVDVSMEA LRCPPDDAKI ADLSGGEKRR VALCKLLLEA
PDMLLLDEPT NHLDAETIAW LQQHLIDYKG TILCVTHDRY FLDDITGWIL ELDRGRGIPY
EGNYSSWLEQ KAKRLEQEAR EDKAKQKTLE RELEWMRQGQ KARQAKSKAR IAAYNEMANT
SEREKVGRAQ IVIPNGPRLG GKVIEVENLG KHYGDKQLIE DLSFSLPPGG IVGVIGPNGA
GKSTLFKMLT GQEQPDQGSV TYGDTVKLSY VDQSRDDLND NDTVWEAISG GAEIIELGDA
QVNSRAYCSS FNFKGGDQQK KLNLLSGGER NRVHMARLLK EGGNVLLLDE PTNDLDVETL
RALEDALVDF AGCAVVISHD RFFLDRICTH ILAFEGDAHV EWFEGNFEDY EEDKKRRLGP
DALEPKRLKH KKFVR
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