Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2248 |
Symbol | |
ID | 4077315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2361977 |
End bp | 2362825 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007570 |
Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
Protein accession | YP_614242 |
Protein GI | 99082088 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.51038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTG CCACTTTGCC CGACCTGATC CTTGAGCCAT TGGTCAAATC CGCCCTGATG GAAGACCTCG GCTCTTATGG CGATGTGACC ACCCGCGCGG TGATCCCCGA TGATGTTACC TATTCCGCCC GCCTGCGCGC CCGCGAAGAG GCGGTGGTCT CTGGCATGCA GGTGGCCGCG CTGGCATTCC GGTTGGTGGA TGCGACCCTT GAGGTGAAGA CCCGCGTTGC AGATGGCGCT GTGTGTCAGC CCGGCGATGT GCTGATGGAG ATCGAGGGCA AGGCGGCGTC GATCCTGATG GGGGAGCGGG TTGCGCTCAA CTTTGCGGGG CGTTTGACGG GGATCGCAAC GCTCACGGCG GCCATGGTCG CTGAAACCCG TGGCACACAG GCACGTATCA CCTGCACCCG CAAGACCACG CCGGGGCTGC GGATGGTCGA AAAGCTGGCG GTATTGCATG GCGGTGGCTT CAATCACCGC TATTCGCTCT CGGATGCCAT CCTCATCAAG GACAACCACA TCGCTGCAGC GGGTGGTATT CGCGCGGTGC TGGATGCCAC CAAGGCGCAT GCCAGCCACA TGATGGCGGT GGAAATCGAA GTGGACACGC TCGATCAGTT GCGCGAGGTG CTGGAGGTCG GCGGTGCCTC CGTTGTGCTC TTGGACAATA TGACGCCTGC TGAGCTGCGT GAGGCGGTCG AGATCAATGC CGGACGTCTG GCGCTCGAGG CCAGCGGCAA CGTCAAACGC GACACAGTGG CGGAAATTGC AGCCACGGGG GTGGATTTCA TCTCCTCGGG GGCGCTCACG CATTCGGCGC GCACCGTCGA TCTGGGGCTT GATTTCTAA
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Protein sequence | MSFATLPDLI LEPLVKSALM EDLGSYGDVT TRAVIPDDVT YSARLRAREE AVVSGMQVAA LAFRLVDATL EVKTRVADGA VCQPGDVLME IEGKAASILM GERVALNFAG RLTGIATLTA AMVAETRGTQ ARITCTRKTT PGLRMVEKLA VLHGGGFNHR YSLSDAILIK DNHIAAAGGI RAVLDATKAH ASHMMAVEIE VDTLDQLREV LEVGGASVVL LDNMTPAELR EAVEINAGRL ALEASGNVKR DTVAEIAATG VDFISSGALT HSARTVDLGL DF
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