| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2242 |
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| Symbol | |
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| ID | 4077309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2355439 |
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| End bp | 2356188 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007564 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_614236 |
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| Protein GI | 99082082 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.246853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG ATCCACGCCA AGAACATGTC CTGATCACGG GCGGCGGCAC CGGTGTTGGG
GCCGCCTGCG CCCAGGCCTT CGCGGCCCAG GGGGCCAAAG TGACCCTGAT GGGGCGAACG
GAGAAAACGC TTGCAGAGCA GGGGCTTCCT TATGAGGTCT GCGATGTAAC GGATGCGCCA
AGCGTCACAT CCGCGGTGGC GCGCGCAGCC GCCGCGCGCG GGCCGGTGAC TGTGGCGATT
GCAAATGCGG GCGCGGCCGA AAGCGTGCCT TTTGCCAAGA TGCAGCCAGA GCTTCTCACG
GAGATGATGG CGGTGAACCT CGGAGGCGTC GTGAACCTCT GGCAGGCGGT GTTGCCGGGC
ATGAAAGAGG CCGGGCGTGG GCGCATGATC GCGGTGGCCT CGACGGCGGG GCTCAAGGGC
TATGCCTATG TCAGCGCCTA TTGCGCCGCC AAACACGCGG TGGTCGGGCT TACTCGCTCG
CTCGCCAAGG AACTGGCGCG CACAGGCGTG ACGGTCAATG CGATCTGTCC GGGGTTTGTG
GAAACGCCGA TGCTCCAGCG CAGCATCGAC AATATCCGCG CCAAGACCGG GATGACATCC
GAGGAGGCCG CAGGCGCCCT CAAGGCCGAC AATCCCCAGG GTCGTTTTGT GCAGCCCGAA
GAGGTCGCGG ATGCTGCGCT CTGGCTGGCG TCGGACACTG CGGGATCGGT GAACGGGCAC
GCGTTGGCCC TGACGGGGGG CGAGATATGA
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| Protein sequence | MSQDPRQEHV LITGGGTGVG AACAQAFAAQ GAKVTLMGRT EKTLAEQGLP YEVCDVTDAP
SVTSAVARAA AARGPVTVAI ANAGAAESVP FAKMQPELLT EMMAVNLGGV VNLWQAVLPG
MKEAGRGRMI AVASTAGLKG YAYVSAYCAA KHAVVGLTRS LAKELARTGV TVNAICPGFV
ETPMLQRSID NIRAKTGMTS EEAAGALKAD NPQGRFVQPE EVADAALWLA SDTAGSVNGH
ALALTGGEI
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