Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2221 |
Symbol | |
ID | 4078212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2332822 |
End bp | 2333205 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638007543 |
Product | hypothetical protein |
Protein accession | YP_614215 |
Protein GI | 99082061 |
COG category | [S] Function unknown |
COG ID | [COG5469] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CGGTGATCTC GCTGTGCCGG ACCTGCCAAG ATGCCGATCC CGCGCTGCTG CCCCAATTGG CAGCGGCGCT GCGGGAGGCT CATCCAAGGG CCCTGCTGCA ATCGGTTGAC TGCATGTCGG GTTGTGCACG CCCGCAGACC CTCTCGGTGC GCCAAAGCGG CAAGACAGCC TATCTCTTTG GGGAGATCAC AGCAGCGGAC CTACCCGATA TACTCAGGTT TCTGCGGCTC TACGAGGCAA GCGCCGATGG CACCTTCACG GATGCGCGCC CAATTGGCGA GCTGAGGTTC AAAGCCATCG CGCGCATCCC TGCCCCCCTG CCCGAAACTA CCGCCGCGTC ACAAACTGGC TCCGCCGCCT CTCCCGAGGA GTGA
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Protein sequence | MTAPVISLCR TCQDADPALL PQLAAALREA HPRALLQSVD CMSGCARPQT LSVRQSGKTA YLFGEITAAD LPDILRFLRL YEASADGTFT DARPIGELRF KAIARIPAPL PETTAASQTG SAASPEE
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