Gene TM1040_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2221 
Symbol 
ID4078212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2332822 
End bp2333205 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content64% 
IMG OID638007543 
Producthypothetical protein 
Protein accessionYP_614215 
Protein GI99082061 
COG category[S] Function unknown 
COG ID[COG5469] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CGGTGATCTC GCTGTGCCGG ACCTGCCAAG ATGCCGATCC CGCGCTGCTG 
CCCCAATTGG CAGCGGCGCT GCGGGAGGCT CATCCAAGGG CCCTGCTGCA ATCGGTTGAC
TGCATGTCGG GTTGTGCACG CCCGCAGACC CTCTCGGTGC GCCAAAGCGG CAAGACAGCC
TATCTCTTTG GGGAGATCAC AGCAGCGGAC CTACCCGATA TACTCAGGTT TCTGCGGCTC
TACGAGGCAA GCGCCGATGG CACCTTCACG GATGCGCGCC CAATTGGCGA GCTGAGGTTC
AAAGCCATCG CGCGCATCCC TGCCCCCCTG CCCGAAACTA CCGCCGCGTC ACAAACTGGC
TCCGCCGCCT CTCCCGAGGA GTGA
 
Protein sequence
MTAPVISLCR TCQDADPALL PQLAAALREA HPRALLQSVD CMSGCARPQT LSVRQSGKTA 
YLFGEITAAD LPDILRFLRL YEASADGTFT DARPIGELRF KAIARIPAPL PETTAASQTG
SAASPEE