Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2191 |
Symbol | |
ID | 4078182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2301194 |
End bp | 2302420 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007513 |
Product | major facilitator transporter |
Protein accession | YP_614185 |
Protein GI | 99082031 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGA TCCTCTCTTT TGCCGCCCTC TTTCTTTCCG TGATTTTGCT TCAGCTCTCG ACCGGAGGTG TGGGGCCGCT GGATGCCATT TCCGGCGCTG CGATGGGGTT TGACAACCGC CAGATCGGCC TTCTGGGCTC GGCGCATTTC TTTGGCTTCT TTATCGGCTG CTGGTGGACC CCGCGCCTTA TGGGTCGTGT CGGACATTCG CGCGCTTTTG CGGTTTGCAC GGCACTTGGC GCGATGGGCC TCTTGGCGCA TACGCTCACG GACGATCCCT ACGCATGGGC CGCCATGCGC ATCGCATCTG GCCTCTGTGT CGCGGGCTGC TACACGGTCA TCGAGGCCTG GATCAACGCA AAGGTCACCA ATGAGAACCG GGGCCGCACC TCCGGTCTCT ATCGTATTGC CGACACCAGT GCGTCTCTGG CGGCGCAGCT GTTGATCGCG GTGCTGCCGC CTGCGCATTA CATCTCGTAT AACCTGCTGG CGATCCTGTG CTGCGCAACG CTGCTGCCGC TGATGATGAC CCGCGCGAGC CAGCCCGAGA TGCCCGCCGC CCCGCGCCTG AGACCCCGTC TGGCCTGGCG TTGTTCACCC CTCGGGGTGG CCGGCGTGAT CGTCTCCGCC CTGAGTGGCG CCTCCTTCAG GATGGTTGGC CCGATCTACG GTCAGGAAGT CGGACTGGTG ATCGACCAGA TCGCCTTTTT CCTTGCCGCC TTCGTTCTGG GCGGCGCGCT CGCGCAGTAC CCCGTGGGCT GGCTTGCGGA TAAATTCGAT CGTCGCTGGG TGCTCATCTG GCTCTCAGGC GTCTCGATGA TTGCCTGCGC CGTGACCCTG CCTGCAAGCG GTGGCGGCAC GATTGCCATC ATGGCGTCGG CGGCTTTCTT CGGCCTGACG ACAGTGCCGA TCTTTTCTGT CTCTGCCGCG CATGCCAATG ACTTTGCCAC CTCCGAAGAG CGGGTGGAAC TCTCAGCGGC CTTGATGTTC TTCTACGCCA CGGGCGCGAT TGCCGCACCC TTTATCGCCT CGGCCCTCAT TGAGGCCTTC GGGCCAGGGG CGCTATTTGT CTTTATCGCA GTGGGGCATG CGGGGTTGAT CGTCTTTGGC CTTGCAAGGA TGCGCAGCCG CGCCACCCCA ACCGAACGCA CCCGCTACGT CTATGCGCCG CGCACGTCAT TCACGATCGG CAAGATGCTG AAACGCGCCC GTGAGGGGCG GCAATGA
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Protein sequence | MRTILSFAAL FLSVILLQLS TGGVGPLDAI SGAAMGFDNR QIGLLGSAHF FGFFIGCWWT PRLMGRVGHS RAFAVCTALG AMGLLAHTLT DDPYAWAAMR IASGLCVAGC YTVIEAWINA KVTNENRGRT SGLYRIADTS ASLAAQLLIA VLPPAHYISY NLLAILCCAT LLPLMMTRAS QPEMPAAPRL RPRLAWRCSP LGVAGVIVSA LSGASFRMVG PIYGQEVGLV IDQIAFFLAA FVLGGALAQY PVGWLADKFD RRWVLIWLSG VSMIACAVTL PASGGGTIAI MASAAFFGLT TVPIFSVSAA HANDFATSEE RVELSAALMF FYATGAIAAP FIASALIEAF GPGALFVFIA VGHAGLIVFG LARMRSRATP TERTRYVYAP RTSFTIGKML KRAREGRQ
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