Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2188 |
Symbol | |
ID | 4078179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2297712 |
End bp | 2298629 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007510 |
Product | hypothetical protein |
Protein accession | YP_614182 |
Protein GI | 99082028 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.390095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTTT CCATGAACCG AGAGGTCTTT ATCACCTGTG CAGTGACCGG CTCTGGGGGA ACGCAGGATC GCAGCCCGCA TGTGCCTCGT TCGCCCAAGG AAATTGCAGA AAGCGCGATT GCCGCCGCCA AGGCAGGGGC CGCGATTGTG CATTGTCATG TGCGCGACCC AGAAACCGGC GCGCCCTCGC GGGATCTTGG TCTTTATCGC GAGGTCACCG ACCGCATCCG CGAGAGCGAT ACCGATGTGG TGTTGAATCT CACTGCGGGC ATGGGGGGCG ATATCGTCTT TGGCGGGGTC GAGCGCCCGC TGCCCGTGAC CGAAGACGGC ACCGACATGA TCGGCGCAAG CGCGCGTGTG GCGCATGTGG CGGAATGCCT GCCGGAGATC TGCACGTTGG ATTGCGGCAC CATGAATTTT GCCGAGGCCG ACTATGTGAT GACCAACACG CCCGGCATGT TGCAGGCGAT GGGGCAGATG ATGACGGATC TTGGCGTGAA GCCCGAGATC GAAGCCTTTG ACACCGGGCA TCTTTGGTAT GCCAAGCAAC TGGTCAAAGA CGGCGTGCTG AAATCGGATG CTCTGGTGCA GCTCTGCATG GGGGTCCCAT GGGGGGCGCC CAATGATCTC AATACTTTTA TGGCGATGGT CAACAATGTG CCCGACGACT GGAACTGGTC GGCGTTCTCG CTGGGGCGTG ATCAGATGGC TTATGTGGCG GCCTCAGTGC TGGCAGGCGG CAATGTGCGC GTGGGGCTGG AGGATAACCT CTATCTCGAC AAGGGCGTGC TGGCCGAAAA CTGGCAACTG GTGGAGCGCG CTGGCACCAT CGTGTCCAAC CTTGGCGCGC GTGTGATCAC GCCGGCAGAA GTGCGCGAGA AGCTTGGCCT GCAGAAACGC GCCCCGATCA CCAAGTAA
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Protein sequence | MPLSMNREVF ITCAVTGSGG TQDRSPHVPR SPKEIAESAI AAAKAGAAIV HCHVRDPETG APSRDLGLYR EVTDRIRESD TDVVLNLTAG MGGDIVFGGV ERPLPVTEDG TDMIGASARV AHVAECLPEI CTLDCGTMNF AEADYVMTNT PGMLQAMGQM MTDLGVKPEI EAFDTGHLWY AKQLVKDGVL KSDALVQLCM GVPWGAPNDL NTFMAMVNNV PDDWNWSAFS LGRDQMAYVA ASVLAGGNVR VGLEDNLYLD KGVLAENWQL VERAGTIVSN LGARVITPAE VREKLGLQKR APITK
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