| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2162 |
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| Symbol | |
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| ID | 4076761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2271969 |
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| End bp | 2272598 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007482 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_614156 |
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| Protein GI | 99082002 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0662359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTT TATCTGAACA TATGTTCAGA TACTCTGTAT ATATGGCACG TACTCAAGGT
TCTCATTCCG ACATCACCGG CCCGCGTATT CGCGCAGCGG CGCAGGAGCT GTTTGCCCGT
CATGGCTATG CGGCGGTCTC CATGCGTCAG ATCGCCGGGG CGGTGGGCGT GCAGGCGGGC
GCGCTTTATA ACTACACTGC TGACAAGCAG AGCCTGCTGT TTGACTTGAT GCAGGCTCAT
ATGGAGGGGC TTCTGACGGC CTGGGCAGCG GAGGATCTGC CTGAGGACGT AATGGGGCAG
TTGGAACGGT TTGTGCGGTT TCACATCCGT TATAACCTCG AACGCCCTGA TGCGGTCTTT
ATTGCGTATA TGGAGTTGCG CAACCTGACC GATGAGAACT TCGCCCGCAT CGAAGAACGC
CGCCGCACCT ATGAAAACCA GCTCGAAGGC ATCCTGAAGG CCGGGGTCAC GCAAGGGCTG
TTTCAGGTGC CCGATACCAA GATCGCAGCA CTTGCGGTGA TTGCGATGCT GAACGGGGTT
TTGACGTGGT ATCGTGATGG CGGGCGGTTG TCGCTTGTAG AGGTGGAGAC GCTCTATTGG
GATATGGTGC GCAAATCTGT CGGGGTGTAG
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| Protein sequence | MPLLSEHMFR YSVYMARTQG SHSDITGPRI RAAAQELFAR HGYAAVSMRQ IAGAVGVQAG
ALYNYTADKQ SLLFDLMQAH MEGLLTAWAA EDLPEDVMGQ LERFVRFHIR YNLERPDAVF
IAYMELRNLT DENFARIEER RRTYENQLEG ILKAGVTQGL FQVPDTKIAA LAVIAMLNGV
LTWYRDGGRL SLVEVETLYW DMVRKSVGV
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