Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2080 |
Symbol | |
ID | 4077831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2183985 |
End bp | 2186429 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638007399 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_614074 |
Protein GI | 99081920 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0351429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC CGATCACCGC CCGCCTCTCG ATTGAAGGAA TGACCTGCGC CGGATGCGTG GGGCGCGTCG ACCGCACATT GGCGGCCCTG CCGGGACTGC GGGACGTCTC GGTGAACCTC GCCAATGAAA CCGCGCAAAT CACTGCCGAG AGCCCCGAGG CCCTGCAACA GGCCGACAGC GCCCTGCGCG ATCTTGGCAA GCCTGCGCGC CATCAGAGCG TGCAGCTCTC GATCGAGGGC ATGACCTGTG GCGGTTGCGT CGGTCGGGTG GAGCGCGCGA TCAAGGCGCT GCCGGGAGTG GTTTCGGCCA ATGTGAACCT TGCCGCCGAG AGCGCGCAGG TGGAGATCCT GCAAGGTGTG GTGACGCCCT CTGAGGTGGC CGCGGCCAGC ACGCAGGCGG GCTATCGTGC GCGCCCCGCA GAGGCAACAG ACACCGAGGA CCGCGCCGCC CGCAAGGATC GTGAAGCGCG CGACCTGCGC CGTCAGGTCA TGATCGCCGC CGCGCTGACG CTGCCTGTAT TTTTGCTCGA GATGGGCGGT CATGTGGTGC CAGCCGTGCA TCACTGGATT GCGCAGACCA TCGGCATGCA AACCTCTTGG GTGATGCAGG CCCTGCTGAC CACGGCGGTT CTGTTCCTGC CCGGACGGGC GTTCTTTACA CTGGGCCTGC CTGCCTTGCG CAAGGGCGCG CCGGATATGA ACAGTCTTGT GGCGCTTGGG GCAGGGGCGG CGTGGATCTA TTCCCTTGTG GCGACCTTTG CGCCCGCGCT GTTGCCCGCC GATGTGCGCG CGGTCTATTT CGAGGCCGCG GCGATGATCG TCACCCTGAT CCTGATCGGG CGCTGGCTTG AGGCGCGCGC CAAGGGCCGC ACCGGCGCCG CCATCCAGGC GCTTGTGGGT CTCCAGGCCC GCCATGCGCG GCGTCTCACC AAGGACGGCC AGCCTGAGGA TGTCGAGGTC GAGGACCTTG CACCCGGCGA CCGCATCTTG GTGCGCCCCG GCGAACGGAT CCCGACCGAT GGCACAGTGC TGGAGGGCAC CGCCCACGTC GATGAGAGCA TGATTTCCGG CGAGCCGATC CCGGTTGAGA AAACCGAAGG CGCGCCTGTG ACCGGCGGCA CCGTGAACGG CGAGGGCAGT CTGACTGTTG CTGTGACTCG CACAGGCGCT GAGACCACGC TGGCCCAGAT CATCCGCATG GTCGAAGACG CCCAGGGCGC CAAACTCCCG ATCCAGAGCC TCGTGGACAA GGTCACCCTG CGCTTTGTGC CGGTGGTGAT GGTTCTGGCG GTCCTAACGG TGGGAGTCTG GCTCTTGGTG GGGCCAGAGC CAAGATTGAC CAACGCCCTT GTGGCGGGCG TGTCGGTGCT CATTATTGCG TGCCCCTGTG CCATGGGGCT GGCAACCCCC ACCTCGATCA TGGTGGGGAC GGGGCGCGCG GCAGAACAGG GGGTGCTGTT TCGCAAGGGG GACGCGCTGC AATCGCTTCA TGAGGTCGAT ATCATTGCCT TTGACAAGAC AGGCACGCTC ACCGAGGGGC GTCCGTCGCT GGTGGCGCTG CGTCCGACCG AAGGGTTCGA ACGGGCAGAG GTGCTGGCCT CGGTGGCGAC AGTGGAGGCC CGCTCGGAGC ATCCCATCGC CCGCGCTTTG GTAACGGCGG CACAGGACGA GGGCCTGAGC CTTGGCGAGG TCAGCAATTT CCAGAGCCTC ACGGCGCGTG GCGTCACGGC TGAGGTGGCG GGGCGCGAGA TCCGGATCGG CAGCGCGCGC CTGATGTCTG AAGCCGGCAT CAGCGTCGAT GCGCTGGCCT CCGAGGCGCT GGAACGCGCC GGGCGCGGTG AAAGCGTGCT CTATGCCGCC ATTGGCGGGC AGTTGGCGGC GCTCCTGGCG GTTGCCGACC CTATCAAACC CACCAGCGCC GAGGCGATCA AGGCCCTGCG CGCCATGGGC AAGGATGTGG CGATGATTTC CGGCGACGCG CCCGCCACGG CAGAGGCCAT CGCGCGCGAT CTCGGCATCA GCCATGTGGT TGCGGGCGTC GCGCCCGAAG GCAAAGTATC CGCACTCAGG GATCTGGCCT CGCGGGGGCG CAAGCTCGGT TTTGTCGGCG ACGGGATCAA TGACGCACCA GCCCTGGCAC AAGCGGATGT GGGGATTGCC ATTGGCACCG GCACCGATGT GGCCATCGAG GCGGGGGATG TGGTCCTGAT GTCGGGCGAC CTGCGCGGTG TCGCGACAGC GATCCAGATC TCGCACAAGA CGCTGGTGAA TATCCGGCAA AATCTCGGCT GGGCCTTTGT TTACAACGCA GCGCTGATCC CGCTGGCGGC AGGGGCTCTC TATCCTGCTT TTGGGATCTT GCTCTCACCG GTCTTTGCAG CCGGGGCGAT GGCGCTTTCT TCGGTGTCGG TGCTCACCAA TGCGCTCCGG CTCAGACGCG CCTGA
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Protein sequence | MTQPITARLS IEGMTCAGCV GRVDRTLAAL PGLRDVSVNL ANETAQITAE SPEALQQADS ALRDLGKPAR HQSVQLSIEG MTCGGCVGRV ERAIKALPGV VSANVNLAAE SAQVEILQGV VTPSEVAAAS TQAGYRARPA EATDTEDRAA RKDREARDLR RQVMIAAALT LPVFLLEMGG HVVPAVHHWI AQTIGMQTSW VMQALLTTAV LFLPGRAFFT LGLPALRKGA PDMNSLVALG AGAAWIYSLV ATFAPALLPA DVRAVYFEAA AMIVTLILIG RWLEARAKGR TGAAIQALVG LQARHARRLT KDGQPEDVEV EDLAPGDRIL VRPGERIPTD GTVLEGTAHV DESMISGEPI PVEKTEGAPV TGGTVNGEGS LTVAVTRTGA ETTLAQIIRM VEDAQGAKLP IQSLVDKVTL RFVPVVMVLA VLTVGVWLLV GPEPRLTNAL VAGVSVLIIA CPCAMGLATP TSIMVGTGRA AEQGVLFRKG DALQSLHEVD IIAFDKTGTL TEGRPSLVAL RPTEGFERAE VLASVATVEA RSEHPIARAL VTAAQDEGLS LGEVSNFQSL TARGVTAEVA GREIRIGSAR LMSEAGISVD ALASEALERA GRGESVLYAA IGGQLAALLA VADPIKPTSA EAIKALRAMG KDVAMISGDA PATAEAIARD LGISHVVAGV APEGKVSALR DLASRGRKLG FVGDGINDAP ALAQADVGIA IGTGTDVAIE AGDVVLMSGD LRGVATAIQI SHKTLVNIRQ NLGWAFVYNA ALIPLAAGAL YPAFGILLSP VFAAGAMALS SVSVLTNALR LRRA
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