Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2075 |
Symbol | |
ID | 4077826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2178130 |
End bp | 2179152 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007394 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_614069 |
Protein GI | 99081915 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.344649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACCT TGAACGAACC CAAGTTGATC TCTGGGAACG CCAATCTTCC GCTCGCTAAA TCGATCTCGC GCCGCATGAG CATGCACCGT GGTGTCGACC AAGACCTCGT GAACGCCCGT GTCGAGCGTT TCAACGATGG CGAGATCTTT GTCGAAGTCT ACGAGAACGT GCGCGGCGAG GATATGTTTA TCATCCAGCC GACCTCGAAC CCGGCCAATG ATAATCTGAT GGAGCTGTTG ATCATCGCCG ATGCGCTGCG CCGTTCCTCG GCCCAGCGGA TCACCGCAGT GATCCCTTAC TTCGGCTACG CCCGTCAGGA CCGCCGCACC AAGGCGCGCA CACCGATTTC AGCCAAGATG GTCGCCAATA TGCTGACCGG CGCGGGCATC GAGCGGGTTC TGACCATGGA TCTGCACGCC GCTCAGATCC AGGGTTTCTT CGATATTCCG GTGGACAACC TCTATGCCAG CCCGATCTTT GCGCTGGACG TGAAGGCGCA GTTCAAGGAC CAGATGGACG ACCTGATGGT GGTTTCGCCC GATGTGGGTG GCGTGGCGCG TGCCCGCGAG CTCGCGAAAC GCATCAACGC CCCCCTGTCG ATCGTCGACA AGCGCCGCGA AAAGGCGGGC GAGATTGCCG AGATGACCGT CATCGGTGAC GTCAAAGACA AGATCTGCCT GATCGTCGAT GACATCTGCG ACACCGCCGG CACCCTCTGC AAGGCCGCGC AGATCCTGCT CGACAATGGC GCCAAGGAAG TCCACGCCTA CATCAGCCAC GGCGTGATGT CCGGCCCCGC CGTGGAACGT GTGACCAATT CGGTGATGAA ATCGCTGGTG CTGACGGACT CGATCCAGCC CACTCAGCCG ATCCTCGACG CGCCCAATAT CCGCATCGTG CCCACCGCGC CGCTCTTTAC GCAGGCGATC CTCAACATCT GGCACGGCAC CTCGGTGTCC TCGCTGTTTG AGGATAAGAC CCTGATCCCG ATCTACGAGT CGCTCTACAA CAGCCAGAGC TAA
|
Protein sequence | MPTLNEPKLI SGNANLPLAK SISRRMSMHR GVDQDLVNAR VERFNDGEIF VEVYENVRGE DMFIIQPTSN PANDNLMELL IIADALRRSS AQRITAVIPY FGYARQDRRT KARTPISAKM VANMLTGAGI ERVLTMDLHA AQIQGFFDIP VDNLYASPIF ALDVKAQFKD QMDDLMVVSP DVGGVARARE LAKRINAPLS IVDKRREKAG EIAEMTVIGD VKDKICLIVD DICDTAGTLC KAAQILLDNG AKEVHAYISH GVMSGPAVER VTNSVMKSLV LTDSIQPTQP ILDAPNIRIV PTAPLFTQAI LNIWHGTSVS SLFEDKTLIP IYESLYNSQS
|
| |