Gene TM1040_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2044 
Symbol 
ID4077971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2150402 
End bp2150866 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID638007362 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_614038 
Protein GI99081884 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG ATATTTACCA AAACCTCAAA CAACTGGGCG GTGAGACCCG CATCCCTGCC 
AGCCCCGAAG AGGCCGAGCT GGAACGGGTG GCAAACCCGC AGGCAGATGT GGCCTATAAC
GTGCGCTTCA CCGCGCCGGA GTTCACCTCG CTCTGTCCGA TGACGGGCCA GCCGGACTTT
GCCCATCTGG TGATCGACTA TGTTCCTGGC CCGTGGCTGG TGGAATCAAA GTCGCTCAAG
CTCTTCCTGA CCTCCTTTCG CAACCACGGC GCCTTTCACG AGGATTGCAC CATCTCGATC
GCGCGGCGGC TGGTCGACTT TCTCGACCCG CAATGGCTGC GGATCGGGGG CTATTGGTAT
CCGCGCGGCG GTATCCCGAT TGATGTCTTT TGGCAGTCCG GCACGATCCC CGAGGGTGTC
TGGATTCCCG ATCAGGGTGT GCCGCCCTAT CGCGGTCGGG GCTGA
 
Protein sequence
MSEDIYQNLK QLGGETRIPA SPEEAELERV ANPQADVAYN VRFTAPEFTS LCPMTGQPDF 
AHLVIDYVPG PWLVESKSLK LFLTSFRNHG AFHEDCTISI ARRLVDFLDP QWLRIGGYWY
PRGGIPIDVF WQSGTIPEGV WIPDQGVPPY RGRG