| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2018 |
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| Symbol | murE |
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| ID | 4077475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2121197 |
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| End bp | 2122681 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007333 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_614012 |
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| Protein GI | 99081858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.821949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA GACCAGCGCT CAAGCTCAGC CAGTTGGGAC TGACCGCAAG AGCGGGCCTG
GACCCGCAGA TCACGGGGCT TGCGGTGGAC AGCCGCGAGG TTGGCGAGGG TTTTGTTTTT
GCCGCCCTGC CCGGCACGCG CGTGCATGGT GCAACCTTTG TCGAACAGGT GCTCGATCAG
GGCGCGGTGG CCATTCTGAC CGACGCCAAG GGCGCCGAGA TCGCAGGCGA GGCCATTGCC
GCAGCGGGCG CAGCCCTTGT GGTGGCCGAA GACCCGCGGC AGGCGCTCTC GGGTGCAGCG
GCGCTCTGGT TTGGCGCCCA GCCCCCGGTG ATGGCAGCCG TGACAGGCAC CAATGGCAAG
ACCTCCGTGT CGACCTTCCT GCGCATGATC TGGACCGAGC TTGGCCACAA GGCCGTGAAC
CTTGGCACCA CCGGCATCGA GGGCGCATGG TCACATCCGC TGGCGCATAC CACGCCCGAG
CCGATCACCC TGCACCGCGC GCTTGCGGCA GCAGCCGAGG CGGGCGTCAC CCATGCGGCG
ATGGAGGCCT CCTCGCATGG GCTGGATCAG CGGCGGCTGG ACGGTGTACA GCTCTCGGCG
GCGGGTTTCA CGAATTTCAC CCAGGATCAC CTCGACTATC ACGAGACCTT TGAGGCCTAT
TTTGCGGCCA AGGCAGGGCT TTTCCGTCGT GTGCTCTCGG AAGATGGCGT CGCCGTCATC
AATATGACCG ACCCCAAAGG GGCTGAGATG CGCGCCATTG CTGCCGCCCG CGGGCAGGAG
ATCATTACGG TTGGGCGCGG TCTGGGTGAC ATTGCCCTGA TGGGTATGCG AGTCGATGCC
ACCGGGCAGG ACATCCGGTT CACATGGCAC GACCGCCCCT TTGCCAAGCG GTTGAACCTC
ATCGGCGGCT TTCAGGCGGA AAACGTGCTG GTGGCGGCGG GTCTGGCGAT TGCCAGCGGC
GAGGACCCCG AGCAGGTGTT TGACACCCTG CCTCACCTCA GCACGGTGCG CGGGCGGATG
CAGCTTGCGG CAACCCGCGA CAATGGCGCG ACGGTGTTTG TGGATTACGC CCACACCCCC
GACGCGGTTG CCACCGCGAT CAAGGCGCTG CGCCCGCATG TTCTGGGCCG CCTTGTGGCG
ATCGTCGGCG CGGGCGGGGA TCGCGATGCA ACCAAACGCC CCTTGATGGG CGCCGCAGCG
CAGGACAATG CCGATGCGGT GATCGTCACC GATGACAACC CCCGCTCTGA AGATCCCGCC
GCCATTCGCG CGGCCGTCAT GGGCGGCGCG CCGGACGCGC TCAATGTGGG CGACCGCGCC
GAAGCGATCC TGCGCGGCGT CGATATGCTC GAGGCTGGCG ATGCGCTCCT CATCTGCGGC
AAGGGCCATG AGAGCGGCCA GACCATCGGC ACCGATGTAT TGCCCTTTGA CGACGTGGAG
CAGGCCAGCA TGGCCGTCGC CGCCCTTGAC GGGAGAATGG TATGA
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| Protein sequence | MTQRPALKLS QLGLTARAGL DPQITGLAVD SREVGEGFVF AALPGTRVHG ATFVEQVLDQ
GAVAILTDAK GAEIAGEAIA AAGAALVVAE DPRQALSGAA ALWFGAQPPV MAAVTGTNGK
TSVSTFLRMI WTELGHKAVN LGTTGIEGAW SHPLAHTTPE PITLHRALAA AAEAGVTHAA
MEASSHGLDQ RRLDGVQLSA AGFTNFTQDH LDYHETFEAY FAAKAGLFRR VLSEDGVAVI
NMTDPKGAEM RAIAAARGQE IITVGRGLGD IALMGMRVDA TGQDIRFTWH DRPFAKRLNL
IGGFQAENVL VAAGLAIASG EDPEQVFDTL PHLSTVRGRM QLAATRDNGA TVFVDYAHTP
DAVATAIKAL RPHVLGRLVA IVGAGGDRDA TKRPLMGAAA QDNADAVIVT DDNPRSEDPA
AIRAAVMGGA PDALNVGDRA EAILRGVDML EAGDALLICG KGHESGQTIG TDVLPFDDVE
QASMAVAALD GRMV
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