Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1985 |
Symbol | |
ID | 4077169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2090043 |
End bp | 2090789 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007300 |
Product | glycine cleavage T protein (aminomethyl transferase) |
Protein accession | YP_613979 |
Protein GI | 99081825 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACC GCCGCATCCT GCGCCTTGAG GGCCCAGACA CCCGCAGTTT CTTGCAGGGC TTGGTCAGCA ATGATGTCAA CAAGGTACAG GACGGTCTTG TCTATGCAGC CATCCTGACG CCCCAGGGCA AATATCTTGC GGATTTCTTC CTTGCGGCGG ATGGGGACGC AGTTCTCCTG GATGTGGCAG AGGCGCTGGC GGATGATCTC GTGAAGCGGC TCAAGATGTA TAAGCTACGC GCCAATGTGA CCCTTGAGGA GACCGACCTC AAGCTGCGCC GCGGCACCGG GGACGCCCCC GAGGGGGCCC TGCCCGACCC CCGCCATCCT GCGCTTGGAT GGCGCCAGTA TGGCAAAGAG ACGTTTGACG ATGGCAGCGA CTGGGACGTG ATCCGGGTGA CGCATGTGAT CCCCGAAACC GGCATCGAAC TCACGCCCGA CAGCTATCTC CTCGAGGTGG GGTTTGAGCG GCTGAACGGC GTCGATTTTC GCAAGGGATG CTATGTCGGC CAAGAGGTCA CCGCACGCAT GAAGCACAAG ACCGAGTTGC GCAAAGGCCT GACACAGGTG GAGATCGACG GCACCGTCCC GGTGGGCGCA CAGATCACCG CTGGCGGCAA AGCCGTGGGT CAGGTTTTTA CGCAATCGGG CGGAAAGGCG ATCGCCTACC TGCGCTTTGA TCGCGCCAAG GGCGCGCTCG AGGCCGAAGG CACCGCGCTG CGCTGGCCCG AGGCGCCCGC CGAGTGA
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Protein sequence | MADRRILRLE GPDTRSFLQG LVSNDVNKVQ DGLVYAAILT PQGKYLADFF LAADGDAVLL DVAEALADDL VKRLKMYKLR ANVTLEETDL KLRRGTGDAP EGALPDPRHP ALGWRQYGKE TFDDGSDWDV IRVTHVIPET GIELTPDSYL LEVGFERLNG VDFRKGCYVG QEVTARMKHK TELRKGLTQV EIDGTVPVGA QITAGGKAVG QVFTQSGGKA IAYLRFDRAK GALEAEGTAL RWPEAPAE
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