Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1959 |
Symbol | |
ID | 4077143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2063653 |
End bp | 2064093 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007274 |
Product | transmembrane pair |
Protein accession | YP_613953 |
Protein GI | 99081799 |
COG category | [S] Function unknown |
COG ID | [COG4125] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.147892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCCC CCCTTGACCG TCTTCGTCAC GCCCTGAGTT TCGAGATCAT CGCCCTGTTG TTGATCGTCC CCCTTGGGGC CGCAGTGTTT CACTTTCCCC TGCACGCAAT CGGGGCTGTC GGCATCGTCA GCGCCACGCT CGCGACCCTG TGGAACCTGA TCTACAACTG GGGCTTTGAT GCGATTTTGC AGCACTGGCG GGGTAGCACG CTCAAGACAC CGATGCTCCG GGTGCTGCAT GCGGTGCTCT TTGAAGGCGG GCTGCTCATC GTGCTGATGC CCTTCATCGC CTGGTATTTG CAGGTTTCGC TCTGGCAGGC CTTTGTGATG GATGTGGCCT TTGCGCTCTT TTACATGGTC TATGCGTTTG GGTTTAACTG GGCCTATGAC CGCCTGTTTC CCCTGAAAGA ATGGCAGGAG GACCACGCCG CGCAACACTA G
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Protein sequence | MRSPLDRLRH ALSFEIIALL LIVPLGAAVF HFPLHAIGAV GIVSATLATL WNLIYNWGFD AILQHWRGST LKTPMLRVLH AVLFEGGLLI VLMPFIAWYL QVSLWQAFVM DVAFALFYMV YAFGFNWAYD RLFPLKEWQE DHAAQH
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