| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1934 |
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| Symbol | |
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| ID | 4076885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2036243 |
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| End bp | 2037481 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007250 |
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| Product | aspartate kinase |
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| Protein accession | YP_613929 |
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| Protein GI | 99081775 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.167611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAC TTGTGATGAA ATTCGGCGGC ACATCCGTCG CCAATCTGGA CCGCATTCGC
CGCGCTGCCA AACGCGTTGG TGTCGAAGTG GCCAAAGGCT ATGACGTGAT CGTCATTGTC
TCCGCCATGT CCGGCAAGAC CAACGAGCTG GTCGGTTGGG TGGGGGAGAC CTCGCCGCTC
TATGATGCGC GTGAATATGA TGCGGTTGTA TCCTCTGGTG AGAATGTGAC CGCGGGCCTC
ATGGCGTTGA CGCTGCAAGA GATGGACGTG CCCGCGCGCA GCTGGCAGGG CTGGCAAGTG
CCGCTCAAGA CCAACTCGGC CCACAGCCAG GCCCGGATCG AAGAGATCGG CACAGAGAAC
ATCAACCAGA AGTTCGGCGA AGGCATGAAA GTGGCCGTTG TTGCGGGCTT TCAGGGGATT
TCTCCCGAAG GTCGCATCAC CACCCTCGGG CGCGGCGGCT CTGACACCAC AGCGGTGGCT
TTTGCGGCGG CCTTCGGGGC GGAGCGCTGC GATATCTACA CCGATGTGGA CGGCGTCTAT
ACCACCGACC CGCGCATCTG CGAAAAGGCA CGCAAGCTCG ACAAGATCGC CTTTGAGGAA
ATGCTGGAGC TGGCATCCTT GGGCGCCAAG GTGCTGCAAA CCCGCTCCGT CGAGCTGGCG
ATGCGCTACA AGGTGAAACT GCGCGTGCTC TCGAGCTTTG AAGAACAGTC CGACGAGGCC
GGAACCCTGG TCTGCGACGA GGAGGAAATC ATGGAATCCA ATGTTGTTAA CGGCGTTGCC
TACTCGCGGG ATGAGGCCAA ACTGACCTGT CTTTCGGTCG CGGACCGTCC GGGCATCGCG
GCGACCATTT TTGGCTGCCT CTCGGATGCC GGCGTCAACG TCGATATGAT CGTGCAGAAC
ATCTCTGAAG ATGGGCGCAC GGATATGACG TTCTCTTGCC CCACGGATCA GGTACAGCGC
GCGGAAATGG CCCTGAACGC CTACAAAGAG AAGGGCGAGC TGAACTTTGC TGAACTCGTG
GCGGACACCG GTGTTGCGAA GATTTCGGTG GTGGGCATCG GCATGCGATC GCAGTCCGGT
GTGGCCGCCA AGATGTTCAA GGTCCTCTCG GATGAGGGCA TCAACATCAA GGTGATCACC
ACCTCCGAGA TCAAGATTTC GGTGCTGGTG GACCGCAAAT ACATGGAGCT CGCCGTGCAG
GCCCTGCACG ACGCCTTTGA GCTCGACAAA GCCAGCTGA
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| Protein sequence | MPLLVMKFGG TSVANLDRIR RAAKRVGVEV AKGYDVIVIV SAMSGKTNEL VGWVGETSPL
YDAREYDAVV SSGENVTAGL MALTLQEMDV PARSWQGWQV PLKTNSAHSQ ARIEEIGTEN
INQKFGEGMK VAVVAGFQGI SPEGRITTLG RGGSDTTAVA FAAAFGAERC DIYTDVDGVY
TTDPRICEKA RKLDKIAFEE MLELASLGAK VLQTRSVELA MRYKVKLRVL SSFEEQSDEA
GTLVCDEEEI MESNVVNGVA YSRDEAKLTC LSVADRPGIA ATIFGCLSDA GVNVDMIVQN
ISEDGRTDMT FSCPTDQVQR AEMALNAYKE KGELNFAELV ADTGVAKISV VGIGMRSQSG
VAAKMFKVLS DEGINIKVIT TSEIKISVLV DRKYMELAVQ ALHDAFELDK AS
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