Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1933 |
Symbol | |
ID | 4076884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2033657 |
End bp | 2035897 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007249 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_613928 |
Protein GI | 99081774 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.940648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.328925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA ACACGGAATC CGAAAGCCGC AAGCTTCTGG GTCGTCTGCG CGAGGCCATG GCAGGGGATG ACGCCGGACA GGCGCGCCTC GACAAGATTA CGCAGCTGAT AGCCGACAGT ATGGGCACCG AAGTGTGCTC TATCTATCTG TTTCGCGACG AAGATACGCT CGAACTCTGC GCCACCGAAG GGCTCAACCG CGAGTCCGTG CACCAGACCC GCATGCGCGT GGGCGAGGGG CTTGTGGGGC GTGTGGCGCG CACGGGCAAG GTGATCAACA CCCCCGATGC GCCAAGCGCG CGGGGCTTTC GCTATATGCC GGAAACCGGC GAGGAGCGCT TCTCCTCATT CCTGGGTATC CCCATCCAGC GCCTTGGCGA GATGATGGGC GTTCTTGTGG TGCAATCCAA GGAAAGCCGC GAATATTCCG CGGACGCGGT CTATGCCCTT GAAGTTGTTG CAATGGTTAT CGCCGAGATG ACCGAACTTG GGGCCTTTGT GGGCGAGGGC TCTGCCATGT CGCCCCTGCA CCAGCAATCT GTGCTCTTGA AGGGTATCGC CGCGCAGGAG GGGGCCGCCG AGGGCAATAT CTGGCTGCAT GAGCCCCGCG TTGTGGTGAC GAACCCGATT GCGGACGATC CGCATCGGGA GCTGGAGCGC CTGCAGGAGG CCGTTGAGGA GCTGCGGGTG GGTGTCGACA AGATGCTGCA GGTCTCATCG AACGGTGACA AGGAACAGGC ACAGGTCCTT GAAACTTATC GCATGTTTGC CAACTCCAAA GGCTGGATGC GGCGCATGGA AGAGGACATT GCCCGTGGCC TGAGCGCCGA AGCTGCAGTT GAAAAAGAAC AATCCCTTGC AAGAGGCCGC ATGGCGCAGG TTCAGGACGC GTATTTGCGT GAGCGCCTGA GCGATCTGGA CGATCTGTCG AACCGCCTGC TGCGTATTTT GACCGGTCAG GGCAAGGATA CCGGCGCAGA ACTGCCGGAA AATCCCATCC TGGTCGCGCG CAATATCGGT CCGGCCGAAT TGTTGGAATA TGGTAGGTCT TTGAAGGGAA TTATCCTTGA AGAGGGCTCT GTAGGTTCGC ATGCGGCAAT TGTAGCGCGG GCATTGGCGA TCCCATTGGT GGTGCGTGTG GCCCGGATCA CTACCGAAGG GCTGAATGGG GATCATGTTT TGGTGGACGG GGACAACGCT GTTGTGCACC TGCGCCCCGA TGATCCTGTC GTCAGCGCCT TTCGCGATAA GATTGCGATG CAAGCGAAGG CCCAGGAACG GTATTCGTCG ATACGTGAGA AACCTGCGAT AACGGTCGAT GGAAAAAGAA TTAACCTGAT GATGAACGCA GGGTTGATGG CAGATCTGCC TTCGCTCGAG AATTCTGGCG CAGAGGGGGT TGGTCTGTTT CGCACTGAGC TGCAGTTCCT GGTGCGCAAT CAGATGCCCA AACGCTCCGA GCTCAAGGGG CTCTACCAGC GTGTGCTGGA GGCTGCAGGT GGCAAACGGG TGGTGTTTCG CACCCTCGAC ATCGGGTCCG ACAAGGTTCT GCCCTATATG AAGCCCACCG ACGAGCCGAA CCCAGCCTTG GGATGGCGCG CAATTCGGGT TGGATTGGAC AAACCCGGTG TGATGCGGAT GCAGCTACAG GCGCTGATCC GCGCGGCCAA CGGCGGGCCT CTTACGGTGA TGTTCCCATT TGTGGCACAA TTCGAGGAAT ACCGCCTCGC GCGCGAGGAG GTGAACAAGA CCATCGAACG CGAGCGCCGT TTGGGACATG TTCTGCCCTC CACGCTCGAG ATCGGCGCCA TGCTGGAGAC CCCATCGCTT GGGTTTGCAC CGCTCAAGTT CTTTGAGGAA GTCGATTTTC TGTCGATTGG CGGCAATGAT CTCAAGCAGT TCTTCTTTGC GGCGGACCGT GAAAACGAAC GGGTGCGACG GCGCTATGAC ACGCTCAACG TGAGCTTCCT GAGCTTTATC GAGCGGATCG TGGAACGCTG CGACATCTCC GGCACGCCGC TGAGCTTTTG TGGTGAGGAT GCCGGCCGCC CGATCGAAGC CGTGTGTCTT GCAGCCATGG GAATTCGCAC CCTTTCGATG CGTCCGGCCT CGATCGGCCC GGTCAAATCT CTGCTGATGC GCGTGGATCT TGGGGAACTG CGCAAGATCA TCTCTGATGC GCGTCATCGC GGTGATCAAA CGGTGCGACC GGCGGTCATG CAGTACCTCC GCGAACTTTG A
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Protein sequence | MVENTESESR KLLGRLREAM AGDDAGQARL DKITQLIADS MGTEVCSIYL FRDEDTLELC ATEGLNRESV HQTRMRVGEG LVGRVARTGK VINTPDAPSA RGFRYMPETG EERFSSFLGI PIQRLGEMMG VLVVQSKESR EYSADAVYAL EVVAMVIAEM TELGAFVGEG SAMSPLHQQS VLLKGIAAQE GAAEGNIWLH EPRVVVTNPI ADDPHRELER LQEAVEELRV GVDKMLQVSS NGDKEQAQVL ETYRMFANSK GWMRRMEEDI ARGLSAEAAV EKEQSLARGR MAQVQDAYLR ERLSDLDDLS NRLLRILTGQ GKDTGAELPE NPILVARNIG PAELLEYGRS LKGIILEEGS VGSHAAIVAR ALAIPLVVRV ARITTEGLNG DHVLVDGDNA VVHLRPDDPV VSAFRDKIAM QAKAQERYSS IREKPAITVD GKRINLMMNA GLMADLPSLE NSGAEGVGLF RTELQFLVRN QMPKRSELKG LYQRVLEAAG GKRVVFRTLD IGSDKVLPYM KPTDEPNPAL GWRAIRVGLD KPGVMRMQLQ ALIRAANGGP LTVMFPFVAQ FEEYRLAREE VNKTIERERR LGHVLPSTLE IGAMLETPSL GFAPLKFFEE VDFLSIGGND LKQFFFAADR ENERVRRRYD TLNVSFLSFI ERIVERCDIS GTPLSFCGED AGRPIEAVCL AAMGIRTLSM RPASIGPVKS LLMRVDLGEL RKIISDARHR GDQTVRPAVM QYLREL
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