| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1916 |
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| Symbol | |
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| ID | 4076867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2017873 |
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| End bp | 2018532 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007232 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_613911 |
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| Protein GI | 99081757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCTG CTGACCCCAT CTGGCACCCG AGCCCCAACT TCGGGGCCCG GAGGGACGGG
CTGCAGCCGC ATCTCATTGT TCTGCACTAC ACGGCAATGG AAAGCGCCGA AGCCGCGCTC
CAGCGGCTCT GTGATCCCGC CTTCGAGGTC TCGGCGCATT ATCTGATCGG CGGCGATGGC
CGTCTTTGGC AGATGGTCGC AGAAGACCAC CGCGCCTGGC ACGCGGGCCA AGGAGAATGG
GCGGGACTTT CGGACATCAA CTCGCGTTCG ATCGGCATCG AGCTCGATAA TCGCGGCGAC
CACCCGTTTT CAGAGCCTCA GATGTGCGTG CTTGAGACGC TCATGGCGCA GATCATGACG
CGCTGGACCA TCCCGGCCAC CGGTGTGATC GGTCACTCTG ACATGGCGCC GGGGCGCAAA
TGGGATCCGG GGCCGCGCTT CGACTGGCAG CGGCTCGCCA CCCTTGGTCT TGCGCGGCCC
AATGGCCAGC CGCTTGCCGC GCCCGCCGCC ACGCCTGAGG CTTTGCGCAA GGCCGCGCAG
GCCTGTGGCT TCACCGCCGA GGTTGACGAC GCCACGCTTC TTCAGGCTGT ACGCCTGCGC
TACCGCCCCT GGGCACGCGG CCCCCTCTGC GGCGAGGACA TTGCGCCACT TCTCTCGTAG
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| Protein sequence | MVSADPIWHP SPNFGARRDG LQPHLIVLHY TAMESAEAAL QRLCDPAFEV SAHYLIGGDG
RLWQMVAEDH RAWHAGQGEW AGLSDINSRS IGIELDNRGD HPFSEPQMCV LETLMAQIMT
RWTIPATGVI GHSDMAPGRK WDPGPRFDWQ RLATLGLARP NGQPLAAPAA TPEALRKAAQ
ACGFTAEVDD ATLLQAVRLR YRPWARGPLC GEDIAPLLS
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