Gene TM1040_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1764 
Symbol 
ID4076793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1854464 
End bp1855252 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID638007079 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_613759 
Protein GI99081605 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGAGT TTGAATTCGC ACGTCCCGAA ACGGTGGCTG ATGCGGTACA GGCGCTGAGC 
GAAGAGGATG CGCAGGCGCT GGGTGGGGGA CAGACGTTGA TCCCGACGTT GAAACAGCGT
TTGGCGATGC CCTCGACGCT GGTGAGCCTC GGCGGGATCG CGGAGATCAG AGGGATCTGT
CAGACAGATG ATGGCAAACT GGCCATCGGC GGGGCGACGA CCCACGCAGA GGTGGCAGAG
GGCGCCGCGG CCTATCCGGC GCTTGCCGCC CTGGCGGGTC AGATCGGCGA TCCGGCAGTG
CGCAATCGTG GCACCATTGG CGGCTCACTT GCCAATAATG ATCCCGCCGC CTGTTACCCG
GCCGCCGCTC TGGCCAGCGG GGCCACGATT GTGACCAATG CCCGCGAGAT CGCGGCGGAT
GACTATTTCC AGGGGATGTT CACCACCGCG CTTGAGGAAG GTGAGATCAT CACCGAGGTG
CGGTTCCCTG TGGCCGAGGC CGCGAATTAC CAGAAGTTTC TGCAGCCGGC GTCGCGGTTT
GCGATGGTCG GGGTGTTCGT CGCGAAATTT GCCGATGGTG TTCGGGTGGC GGTCACAGGT
GCCTCTGAGG AAGGCGTGTT CCGCTGGCGC GAGGCGGAGG CTGCGCTCTC GGGCGCTTTC
AGCGCTGATG CGATTTCAGG CCTGTCGGTA GAGGCCGAGG GCATGATCGG CGACATCCAT
GGCACCAAGG ACTATCGCGC GCATCTCGTG ACCGTGATGA CCAAACGTGC CGTTGCGGCC
GCGGGCTGA
 
Protein sequence
MYEFEFARPE TVADAVQALS EEDAQALGGG QTLIPTLKQR LAMPSTLVSL GGIAEIRGIC 
QTDDGKLAIG GATTHAEVAE GAAAYPALAA LAGQIGDPAV RNRGTIGGSL ANNDPAACYP
AAALASGATI VTNAREIAAD DYFQGMFTTA LEEGEIITEV RFPVAEAANY QKFLQPASRF
AMVGVFVAKF ADGVRVAVTG ASEEGVFRWR EAEAALSGAF SADAISGLSV EAEGMIGDIH
GTKDYRAHLV TVMTKRAVAA AG