| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1750 |
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| Symbol | |
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| ID | 4075814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1843111 |
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| End bp | 1843791 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007064 |
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| Product | ThiJ/PfpI |
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| Protein accession | YP_613745 |
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| Protein GI | 99081591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.45981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TTTTGATCCT CTCCACCGCA GCCGATGTAC TGGGCGACAC CGGAAAACCG
ACGGGCGTGT GGTACGAAGA GCTGGCTACC CCGTACTACG CGTTCCTCGA TGCCGGTCAC
GAGGTCACGC TGGTGACGCT CGAAGGTAAG CCTGTACCGA TTGATCCGAA CTCCGACGAA
ACTGGCGATG CGGCGCCGGC CTCGGTCACG CGGTTTCGCG CAGATGCAGC GGCAACAGCC
TTGCTCGCCA AGCCCGGTCG CCTCGAAGAC GAGGATGTCA CCGCCTATGA TGCGCTCTAC
ATTCCGGGCG GGCACGGCGC GATGTATGAC CTCGCCGAGA GCGCGACGGC AGCAGCCGCG
ATTGGCAAGG CCTGGGACAG CGGCAAGGTC GTCGCGTCGG TCTGCCATGG CCCTGCGGCC
TTTGCCAAGG TTGTGGATGC CAAGGGCGAG CCCATCGTCA AGGGGCGCAA AGTGACCGCT
TTCACCAACA GTGAAGAAAC GGCCGTAGGG CTCGAAAAAG CGGTACCCTT CCTGCTTGAG
ACCAAGCTGC GCGAACTTGG CGCAGAGTTT GAGAATGTCG CGGATTGGCA GCCTCTTGCG
GTGGCCGATG GTCAATTGGT GACCGGTCAG AACCCAGCCT CTTCGGAAGC TGCAGCCAAG
GAAGTTCTGG CGCTATTGTA A
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| Protein sequence | MARILILSTA ADVLGDTGKP TGVWYEELAT PYYAFLDAGH EVTLVTLEGK PVPIDPNSDE
TGDAAPASVT RFRADAAATA LLAKPGRLED EDVTAYDALY IPGGHGAMYD LAESATAAAA
IGKAWDSGKV VASVCHGPAA FAKVVDAKGE PIVKGRKVTA FTNSEETAVG LEKAVPFLLE
TKLRELGAEF ENVADWQPLA VADGQLVTGQ NPASSEAAAK EVLALL
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