Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1734 |
Symbol | |
ID | 4075798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1828535 |
End bp | 1829737 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007048 |
Product | aspartate aminotransferase |
Protein accession | YP_613729 |
Protein GI | 99081575 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.395595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTC TTTCTGCGAC ACTTTCCCGC GTGAAGCCTT CCCCGACCAT TGCCGTCACC AATAAGGCGC GTGAATTGAA AGCCGCCGGT CGCGACGTGA TCGGCCTTGG TGCGGGGGAA CCGGATTTCG ACACGCCACA ATCCATCAAG GATGCCGCTG TCCGTGCCAT TGCCGAGGGC AAGACCAAAT ACACAGCCGT CGATGGCATC CCGGAGCTGA AGCAGACCAT CTGCGAAAAG TTCAAGCGTG ACAATGGCCT GGACTATCGC CCGGAGCAGG TCACGGTAAA CTCTGGCGGC AAGCAGACGC TGTATAACGC CCTGATGGCG ACCCTCAATC CCGGCGATGA GGTGATCATC CCCGCGCCCT ATTGGGTGAG CTATCCTGAC ATGGTGCTCC TTGCAGGAGG CACTCCGGTT CCGGTGGAGG CCAGCCTTGA GAGCAGCTTC AAACTGACGC CCGATCAGTT GGAGGCCGCC ATCACCGACA AGACCAAATG GTTCATCTTC AATTCTCCCT CCAACCCGAC CGGAGCCGGA TATTCGCGCG CCGAATTGAA AGCTCTGACG GATGTCTTGA TGCGTCATCC CCATGTCTGG GTGATGACCG ATGACATGTA TGAACACCTC GCCTATGACG ATTTCGAATT CTGCACACCG GCGCAGGTTG AACCGGGACT CTATGACCGC ACCCTCACCT GCAACGGGGT TTCCAAAGCC TATGCGATGA CTGGCTGGCG GATCGGCTAT GCGGCGGGTC CGGAAACTCT GATTGCGGCG ATGCGCAAGG TGCAGTCGCA GTCTACCTCG AACCCCTGTT CGGTCAGCCA ATATGCCGCG CTCGAAGCGC TCACGGGGCC GCAGGATTTC CTCGCCAGCA ACAATGAGAT CTTCGTGCGG CGGCGCAATC TGGTGGTGTC GATGCTGTCG GAGATCGATG GCTTGACCTG CCCGGTGCCG GAGGGCGCTT TTTATGTCTA CCCCTCGATC GCGGGTCTCA TTGGCAAGAC AACGCCAAAA GGCGTAACCA TCAACAGCGA TGAGGATTTT GCCACCGCCC TTCTGGAAGA GGCCGATGTG GCCGTGGTGT TTGGCGCAGC CTTTGGCCTC TCGCCGAATT TTCGTGTGAG CTATGCAACC TCCGATGACG CCCTCAAGGA AGCCTGCACG CGCATCCAGC GCTTCTGCGC CTCGCTCAGC TGA
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Protein sequence | MSVLSATLSR VKPSPTIAVT NKARELKAAG RDVIGLGAGE PDFDTPQSIK DAAVRAIAEG KTKYTAVDGI PELKQTICEK FKRDNGLDYR PEQVTVNSGG KQTLYNALMA TLNPGDEVII PAPYWVSYPD MVLLAGGTPV PVEASLESSF KLTPDQLEAA ITDKTKWFIF NSPSNPTGAG YSRAELKALT DVLMRHPHVW VMTDDMYEHL AYDDFEFCTP AQVEPGLYDR TLTCNGVSKA YAMTGWRIGY AAGPETLIAA MRKVQSQSTS NPCSVSQYAA LEALTGPQDF LASNNEIFVR RRNLVVSMLS EIDGLTCPVP EGAFYVYPSI AGLIGKTTPK GVTINSDEDF ATALLEEADV AVVFGAAFGL SPNFRVSYAT SDDALKEACT RIQRFCASLS
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